FDA-ARGOS is a database with public quality-controlled reference genomes for diagnostic use and regulatory science
Data in this project is grouped by category: <a href="https://data.test.argosdb.org/actinomycetes/">Actinomycetes</a>, <a href="https://data.test.argosdb.org/bacillaceae/">Bacillaceae</a>, <a href="https://data.test.argosdb.org/bacteroidota/">Bacteroidota</a>, <a href="https://data.test.argosdb.org/escherichia/">Escherichia</a>, <a href="https://data.test.argosdb.org/eukaryota/">Eukaryota</a>, <a href="https://data.test.argosdb.org/klebsiella/">Klebsiella</a>, <a href="https://data.test.argosdb.org/lactobacillales/">Lactobacillales</a>, <a href="https://data.test.argosdb.org/alphaproteobacteria/">Alphaproteobacteria</a>, <a href="https://data.test.argosdb.org/betaproteobacteria/">Betaproteobacteria</a>, <a href="https://data.test.argosdb.org/gammaproteobacteria/">Gammaproteobacteria</a>, <a href="https://data.test.argosdb.org/enterobacteriaceae/">Enterobacteriaceae</a>, <a href="https://data.test.argosdb.org/saccharomyces/">Saccharomyces</a>, <a href="https://data.test.argosdb.org/salmonella/">Salmonella</a>, <a href="https://data.test.argosdb.org/staphylococcus/">Staphylococcus</a>, <a href="https://data.test.argosdb.org/viruses/">Viruses</a>, <a href="https://data.test.argosdb.org/other/">Other</a>
- Abiotrophia defectiva
- Achromobacter deleyi
- Achromobacter denit...
- Achromobacter insol...
- Achromobacter pestifer
- Achromobacter xylos...
- Acidaminococcus fer...
- Acinetobacter bauma...
- Acinetobacter calco...
- Acinetobacter haemo...
- Acinetobacter johns...
- Acinetobacter lwoffii
- Acinetobacter nosoc...
- Acinetobacter pittii
- Acinetobacter radio...
- Acinetobacter seife...
- Acinetobacter septicus
- Acinetobacter sp FD...
- Acinetobacter sp FD...
- Acinetobacter sp FD...
- Acinetobacter sp FD...
- Acinetobacter sp FD...
- Acinetobacter sp FD...
- Acinetobacter sp FD...
- Acinetobacter sp FD...
- Acinetobacter sp FD...
- Acinetobacter sp FD...
- Acinetobacter ursingii
- Acinetobacter varia...
- Actinomyces naeslundii
- Actinomyces oris
- Aerococcus urinae
- Aerococcus viridans
- Aeromonas allosacch...
- Aeromonas caviae
- Aeromonas enteropel...
- Aeromonas hydrophila
- Aeromonas jandaei
- Aeromonas sp FDAARG...
- Aeromonas sp FDAARG...
- Aeromonas sp FDAARG...
- Aeromonas sp FDAARG...
- Aeromonas sp FDAARG...
- Aeromonas sp FDAARG...
- Aeromonas sp FDAARG...
- Aeromonas sp FDAARG...
- Aeromonas sp FDAARG...
- Aeromonas sp FDAARG...
- Aeromonas sp FDAARG...
- Aeromonas sp FDAARG...
- Aeromonas sp FDAARG...
- Aeromonas sp FDAARG...
- Aeromonas sp FDAARG...
- Aeromonas sp FDAARG...
- Aeromonas veronii
- Aggregatibacter act...
- Aggregatibacter aph...
- Aggregatibacter segnis
- Agrobacterium pusense
- Agrobacterium sp FD...
- Agrobacterium tumef...
- Alcaligenes faecalis
- Alistipes senegalensis
- Amycolatopsis sp FD...
- Anaerococcus degeneri
- Anaerococcus murdochii
- Anaerococcus obesie...
- Anaerococcus vaginalis
- Arachnia propionica
- Aspergillus niger
- Atlantibacter herma...
- Bacillus anthracis
- Bacillus cereus
- Bacillus licheniformis
- Bacillus mycoides
- Bacillus sp FDAARGO...
- Bacillus sp FDAARGO...
- Bacillus sp in firm...
- Bacillus subtilis
- Bacillus thuringiensis
- Bacillus tropicus
- Bacteroides caccae
- Bacteroides cellulo...
- Bacteroides eggerthii
- Bacteroides fragilis
- Bacteroides nordii
- Bacteroides ovatus
- Bacteroides thetaio...
- Bacteroides uniformis
- Bartonella bacillif...
- Bartonella henselae
- Bifidobacterium breve
- Blautia massiliensi...
- Bordetella bronchis...
- Bordetella hinzii
- Bordetella holmesii
- Bordetella parapert...
- Bordetella pertussis
- Borreliella burgdor...
- Brevibacterium casei
- Brevundimonas diminuta
- Brevundimonas vesic...
- Brucella anthropi
- Brucella canis
- Budvicia aquatica
- Bundibugyo virus
- Burkholderia ambifaria
- Burkholderia cenoce...
- Burkholderia cepacia
- Burkholderia dolosa
- Burkholderia gladioli
- Burkholderia glumae
- Burkholderia humpty...
- Burkholderia mallei
- Burkholderia multiv...
- Burkholderia oklaho...
- Burkholderia plantarii
- Burkholderia pseudo...
- Burkholderia thaila...
- Burkholderia vietna...
- Butyricimonas virosa
- Campylobacter coli
- Campylobacter curvus
- Campylobacter fetus...
- Campylobacter gracilis
- Campylobacter hominis
- Campylobacter jejuni
- Campylobacter jejun...
- Campylobacter lari
- Campylobacter rectus
- Campylobacter upsal...
- Campylobacter ureol...
- Candida albicans
- Candida parapsilosis
- Capnocytophaga ochr...
- Capnocytophaga sp F...
- Cedecea neteri
- Cedecea sp FDAARGOS...
- Chikungunya virus
- Chromobacterium vio...
- Chryseobacterium ar...
- Chryseobacterium ga...
- Chryseobacterium gleum
- Chryseobacterium in...
- Chryseobacterium sp...
- Citrobacter amalona...
- Citrobacter braakii
- Citrobacter europaeus
- Citrobacter farmeri
- Citrobacter freundii
- Citrobacter koseri
- Citrobacter pasteurii
- Citrobacter portuca...
- Citrobacter sp FDAA...
- Citrobacter werkmanii
- Clavispora lusitaniae
- Clostridioides diff...
- Clostridium innocuum
- Clostridium perfrin...
- Clostridium scindens
- Clostridium septicum
- Clostridium sp M62 1
- Clostridium sporogenes
- Collinsella stercor...
- Comamonas terrigena
- Coprococcus comes
- Coprococcus eutactu...
- Corynebacterium amy...
- Corynebacterium aur...
- Corynebacterium bovis
- Corynebacterium coy...
- Corynebacterium dip...
- Corynebacterium dip...
- Corynebacterium fal...
- Corynebacterium fre...
- Corynebacterium glu...
- Corynebacterium jei...
- Corynebacterium kef...
- Corynebacterium kro...
- Corynebacterium mac...
- Corynebacterium min...
- Corynebacterium pro...
- Corynebacterium rie...
- Corynebacterium sp ...
- Corynebacterium str...
- Corynebacterium tub...
- Corynebacterium ulc...
- Corynebacterium ure...
- Corynebacterium xer...
- Cronobacter sakazakii
- Cupriavidus gilardii
- Cupriavidus metalli...
- Cupriavidus necator
- Cupriavidus pauculus
- Cutibacterium acnes
- Delftia acidovorans
- Delftia lacustris
- Dengue virus
- Dermabacter jinjuensis
- Dermabacter vaginalis
- Dermacoccus nishino...
- ELIXIR ENA
- Eastern equine ence...
- Edwardsiella hoshinae
- Edwardsiella tarda
- Eikenella corrodens
- Elizabethkingia ano...
- Elizabethkingia bru...
- Enterobacter asburiae
- Enterobacter bugand...
- Enterobacter cancer...
- Enterobacter cloacae
- Enterobacter cloaca...
- Enterobacter hormae...
- Enterobacter hormae...
- Enterobacter ludwigii
- Enterobacter roggen...
- Enterocloster bolteae
- Enterocloster clost...
- Enterococcus avium
- Enterococcus cassel...
- Enterococcus durans
- Enterococcus faecalis
- Enterococcus faecium
- Enterococcus gallin...
- Enterococcus hirae
- Enterococcus sp FDA...
- Enterococcus sp FDA...
- Escherichia coli
- Escherichia fergusonii
- Fannyhessea vaginae
- Faucicola osloensis
- Finegoldia magna
- Francisella tularensis
- Fusobacterium canif...
- Fusobacterium necro...
- Gardnerella vaginalis
- Gemella haemolysans
- Gemella morbillorum
- Gemella sanguinis
- Gordonia bronchialis
- Gordonia otitidis
- Granulicatella adia...
- Granulicatella elegans
- Grimontia hollisae
- Haemophilus aegyptius
- Haemophilus ducreyi
- Haemophilus influenzae
- Haemophilus parahae...
- Haemophilus parainf...
- Hafnia alvei
- Hafnia paralvei
- Helicobacter pylori
- Henipavirus hendraense
- Henipavirus nipahense
- Heyndrickxia coagulans
- Hoylesella buccalis
- Jonesia denitrificans
- Kingella denitrificans
- Klebsiella aerogenes
- Klebsiella michigan...
- Klebsiella oxytoca
- Klebsiella pneumoniae
- Klebsiella quasipne...
- Klebsiella sp FDAAR...
- Klebsiella variicola
- Kocuria rhizophila
- Kytococcus sedentarius
- Lachnospira eligens
- Lachnospiraceae bac...
- Lacrimispora saccha...
- Lactobacillus crisp...
- Lactobacillus jensenii
- Lactococcus garvieae
- Lactococcus lactis
- Leclercia adecarbox...
- Legionella anisa
- Legionella longbeachae
- Legionella pneumophila
- Legionella pneumoph...
- Leishmania donovani
- Lelliottia amnigena
- Leptospira interrog...
- Leuconostoc falkenb...
- Leuconostoc mesente...
- Leuconostoc pseudom...
- Listeria innocua
- Listeria monocytogenes
- Listeria welshimeri
- Lysinibacillus macr...
- Macrococcoides case...
- Mammaliicoccus fleu...
- Mammaliicoccus sciuri
- Mammaliicoccus vitu...
- Mammarenavirus chap...
- Mammarenavirus guan...
- Mammarenavirus juni...
- Mammarenavirus lass...
- Mammarenavirus mach...
- Mediterraneibacter ...
- Micrococcus luteus
- Micrococcus sp FDAA...
- Middle East respira...
- Mobiluncus curtisii
- Mobiluncus mulieris
- Monkeypox virus
- Moraxella catarrhalis
- Moraxella nonliquef...
- Morganella morganii
- Mycobacterium avium...
- Mycobacterium avium...
- Mycobacterium intra...
- Mycobacterium intra...
- Mycobacterium kansasii
- Mycobacterium ostra...
- Mycobacterium tuber...
- Mycobacteroides abs...
- Mycobacteroides abs...
- Mycolicibacterium s...
- Myroides odoratus
- Neisseria cinerea
- Neisseria gonorrhoeae
- Neisseria meningitidis
- Neisseria mucosa
- Niallia circulans
- Nocardia abscessus
- Nocardia africana
- Nocardia asteroides
- Nocardia brasiliensis
- Nocardia gipuzkoensis
- Nocardia sp FDAARGO...
- Nocardia yamanashie...
- Odoribacter splanch...
- Oligella ureolytica
- Oligella urethralis
- Orthomarburgvirus m...
- Orthonairovirus hae...
- Pandoraea apista
- Pantoea agglomerans
- Pantoea ananatis
- Pantoea sp FDAARGOS...
- Pantoea vagans
- Parabacteroides dis...
- Parabacteroides gor...
- Parabacteroides joh...
- Parabacteroides merdae
- Paraburkholderia fu...
- Paraburkholderia gi...
- Paracoccus yeei
- Parvimonas micra
- Pasteurella multocida
- Pediococcus acidila...
- Pediococcus pentosa...
- Peptoniphilus asacc...
- Peptoniphilus harei
- Peribacillus psychr...
- Phocaeicola coproco...
- Phocaeicola coproph...
- Phocaeicola dorei
- Phocaeicola vulgatus
- Plesiomonas shigell...
- Pluralibacter gergo...
- Porphyromonas endod...
- Prescottella equi
- Prevotella melanino...
- Prevotella nigrescens
- Propionibacterium a...
- Proteus mirabilis
- Proteus penneri
- Proteus vulgaris
- Providencia alcalif...
- Providencia rettgeri
- Providencia stuartii
- Pseudomonas aeruginosa
- Pseudomonas fluores...
- Pseudomonas fulva
- Pseudomonas luteola
- Pseudomonas monteilii
- Pseudomonas oryziha...
- Pseudomonas protegens
- Pseudomonas putida
- Pseudomonas sp FDAA...
- Pseudomonas sp FDAA...
- Psychrobacter cryoh...
- Psychrobacter sangu...
- Psychrobacter sp FD...
- Ralstonia pickettii
- Raoultella ornithin...
- Raoultella planticola
- Reston ebolavirus
- Rhodanobacter sp FD...
- Rift Valley fever v...
- Roseburia inulinivo...
- Roseobacter denitri...
- Roseomonas mucosa
- Roseomonas sp FDAAR...
- Ross River virus
- Rothia aeria
- Rothia dentocariosa
- Rothia kristinae
- Rothia mucilaginosa
- Ruminococcus albus 8
- Saccharomyces cerev...
- Salmonella enterica
- Salmonella enterica...
- Salmonella enterica...
- Salmonella enterica...
- Salmonella enterica...
- Salmonella enterica...
- Salmonella enterica...
- Salmonella enterica...
- Salmonella enterica...
- Salmonella enterica...
- Salmonella enterica...
- Schaalia meyeri
- Schaalia odontolytica
- Segatella copri DSM...
- Serratia fonticola
- Serratia liquefaciens
- Serratia marcescens
- Serratia odorifera
- Serratia plymuthica
- Serratia rubidaea
- Serratia sp FDAARGO...
- Serratia ureilytica
- Severe acute respir...
- Shewanella putrefac...
- Shewanella sp FDAAR...
- Shigella boydii
- Shigella flexneri
- Shigella sonnei
- Sphingobacterium mu...
- Sphingobacterium sp...
- Sphingomonas paucim...
- Staphylococcus aureus
- Staphylococcus auri...
- Staphylococcus capitis
- Staphylococcus carn...
- Staphylococcus cohnii
- Staphylococcus cond...
- Staphylococcus epid...
- Staphylococcus equorum
- Staphylococcus felis
- Staphylococcus haem...
- Staphylococcus hominis
- Staphylococcus lugd...
- Staphylococcus past...
- Staphylococcus pett...
- Staphylococcus pseu...
- Staphylococcus sacc...
- Staphylococcus sapr...
- Staphylococcus simu...
- Staphylococcus sp F...
- Staphylococcus warneri
- Stenotrophomonas ma...
- Streptobacillus mon...
- Streptococcus agala...
- Streptococcus angin...
- Streptococcus angin...
- Streptococcus const...
- Streptococcus dysga...
- Streptococcus equinus
- Streptococcus gallo...
- Streptococcus gordonii
- Streptococcus infan...
- Streptococcus inter...
- Streptococcus lutet...
- Streptococcus mitis
- Streptococcus mutans
- Streptococcus oralis
- Streptococcus pneum...
- Streptococcus pyogenes
- Streptococcus saliv...
- Streptococcus sangu...
- Streptococcus sp FD...
- Streptococcus sp FD...
- Streptococcus sp FD...
- Streptococcus sp FD...
- Streptococcus sp FD...
- Streptococcus sp FD...
- Streptococcus sp gr...
- Streptococcus therm...
- Streptomyces califo...
- Stutzerimonas balea...
- Stutzerimonas degra...
- Stutzerimonas frequens
- Stutzerimonas stutzeri
- Sudan ebolavirus
- Sutterella wadswort...
- Tai Forest ebolavirus
- Thomasclavelia ramosa
- Tsukamurella paurom...
- Veillonella parvula
- Venezuelan equine e...
- Vibrio alginolyticus
- Vibrio cholerae
- Vibrio diabolicus
- Vibrio fluvialis
- Vibrio furnissii
- Vibrio harveyi
- Vibrio mimicus
- Vibrio parahaemolyt...
- Vibrio vulnificus
- Weissella paramesen...
- West Nile virus
- Yellow fever virus
- Yersinia enterocoli...
- Yersinia frederiksenii
- Yersinia intermedia
- Yersinia kristensenii
- Yersinia pestis
- Yersinia pseudotube...
- Yersinia sp FDAARGO...
- Zaire ebolavirus
- Zika virus
- z51
Provenance | |
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Instrument | Illumina HiSeq 2500; PacBio RS; Illumina MiSeq; Illumina HiSeq 4000; Illumina NovaSeq 6000; Sequel; Sequel II; Illumina HiSeq 2000; ILLUMINA; PACBIO_SMRT |
Publisher | Blue-Cloud Data Discovery & Access service; ELIXIR-ENA |
Publication Year | 2025 |
OpenAccess | true |
Contact | blue-cloud-support(at)maris.nl |
Representation | |
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Discipline | Marine Science |
Temporal Coverage Begin | 1909-01-01T00:00:00Z |
Temporal Coverage End | 2022-01-06T00:00:00Z |