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FDA-CFSAN: microbial foodborne pathogen research
Draft and complete genome sequences of foodborne bacterial pathogens collected for research purposes at the FDA's Center for Food Safety and Applied Nutrition. -
FDA-ARGOS is a database with public quality-controlled reference genomes for ...
Data in this project is grouped by category: <a href="https://data.test.argosdb.org/actinomycetes/">Actinomycetes</a>, <a... -
Draft genome sequences of transconjugants harboring PromA plasmids
Nucleotide sequences including G+C contents and oligonucleotide compositions tend to be more similar between plasmid and hosts' chromosome than between the plasmid and non-host... -
WGS of bacteria used in a diverse Mock
A total of 227 genomes were sequenced using Illumina HiSeq 4000, as will serve as a baseline for benchmarking various metagenomics tools. In addition, 61 other genomes used for... -
VF-KNN method validation
Contains next-generation sequencing (NGS) data of pathogens isolated from soil and groundwater, used for validating the VF-KNN method in the paper 'A Virulence Factor Gene-Based... -
FDA medical products genome sequencing and assembly of multi-species isolates
Whole genome sequencing of pure cultured microbial isolates of multiple species as part of the Food and Drug Administration surveillance effort of pathogens in medical products. -
heterotrophic endophytic bacteria in four kinds of edible raw vegetables
Antibiotic resistance and related species of heterotrophic endophytic bacteria in four kinds of edible raw vegetables -
paddy soil 16S sequence
Integrated metabolome and microbiome reveal soil microbial dynamics, metabolic functions and and their correlation in a millennium paddy soil chronosequence -
Bacteria isolated from Humulus lupulus cones. Includes Pantoa and Pseudomonas...
Genome Sequencing and Assembly of Pantoa and Pseudomonas sp. isolated from hop cones collected in Bradford, NH. -
soil bacterial isolates
The different 122 bacteria isolated from soil aggregates under three fertilizer treatments
