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carbapenem-resistant gram-negative bacteria Genome sequencing and assembly
Draft genomes of carbapenem-resistant gram-negative bacteria isolated from two tertiary hospitals in the Philippines as part of the ORiGiN Study: An Online Registry of... -
Harmonization of whole genome sequencing for outbreak surveillance of Enterob...
The surge and dissemination of antimicrobial resistance (AMR) has grown to an issue of worldwide proportions. Key objectives in fighting this problem are preventing the spread... -
NDM-7 K.pneumoniae from Almeria
Molecular characterization of an outbreak of NDM-7-producing Klebsiella pneumoniae reveals interclonal plasmid transmission -
Agarose gel microcapsule enables easy-to-prepare, picolitre-scale single-cell...
Single-cell genome analysis of human-gut bacterial strains and termite-gut bacterial community by MDA-in-AGM and FACS-MDA. -
Campylobacter study (Patho-NGen-Trace)
Campylobacter study (Patho-NGen-Trace): Samples from sentinel surveillance scheme for human Campylobacteriosis in Oxfordshire. Isolates sequenced by Genoscreen (France) as part... -
Genotypic characterization of Carbapenemase producing organisms obtained in D...
From February 24th through January 23th 2023, 77 carbapenemase producing organisms were collected as part of the mandatory screening for CPO from 42 patients originating from... -
Draft genome sequences of transconjugants harboring PromA plasmids
Nucleotide sequences including G+C contents and oligonucleotide compositions tend to be more similar between plasmid and hosts' chromosome than between the plasmid and non-host... -
Multi_Drug_Resistant_Gram_Negative_Rods__MDR_GNR__sequencing_study
http://www.sanger.ac.uk/resources/downloads/bacteria/ These data are part of a pre-publication release. For information on the proper use of pre-publication data shared by the... -
NIHR_Global_Health_Research_Unit_on_Genomic_Surveillance_of_Antimicrobial_Res...
This project is funded by the UK National Institute for Health Research to set up a full-fledged Global Health Research Unit (GHRU) through a grant awarded to the cGPS (Centre... -
The_investigation_of_the_genetic_environment_of_16S_rRNA_methytransferases
WGS data from bacterial isolates positive for 16S rRNA methytransferases (16S RMTases) will be analysed to investigate the genetic environment of the 16S RMTases in order to see... -
SC PHL pathogens isolated from wastewater samples that are not routine Genome...
Whole genome sequencing of wastewater isolates that do not fall into GenomeTrakr enteric or ESKAPE organisms. -
FDA-CFSAN: microbial foodborne pathogen research
Draft and complete genome sequences of foodborne bacterial pathogens collected for research purposes at the FDA's Center for Food Safety and Applied Nutrition. -
Phytate culturomics WGS sequencing
Phytate is the primarily storage form of phosphorous in plants and abundant in seeds. Phytases produced by intestinal bacteria are assumed to continuously release myo-inositol... -
Escherichia coli
The project goals are to study DNA sequence, transcriptomic, and phenotypic variations among strains of Shiga toxin producing Escherichia coli in reference to biofilm formation... -
Study on the prevalence of antibiotic resistance in foodborne bacterial patho...
This project focuses on three foods of chicken meats, fishery products and vegetables. We plan to isolate Campylobacter, Salmonella and Listeria from chicken meats, Vibrio,... -
Transcriptome of Litoditis marina and Shewanella algae and Escherichia coli OP50
Multi-omics approaches including transcriptome of both L. marina and bacteria, as well as com-parative bacterial metabolome, were utilized to investigate how bacterial food... -
Bloodstream_surveillence_across_Africas
A survey across centres in Africa into the main bacterial causes of bloodstream infections. These data are part of a pre-publication release. For information on the proper use... -
Replication data for: Colistin delivery by poly(dimethylsiloxane)-g-poly(ethy...
The data describes: - preparation of polymer vesicles with encapsulated colistin (size distributions by dynamic light scattering, zeta potentials, cryo-electron microscopy... -
Replication Data for: Extracellular vesicles from Escherichia coli strains of...
Experimental data related to the study analyzing the effects of extracellular vesicles (EVs) derived from probiotic and commensal E. coli strains on liver function via the... -
Replication Data for: Enumeration Agar, Acid Exposure and Sampling Time Are R...
The aim was to assess the impact of the enumeration agar (non-selective or selective agar) on High pressure processing (HPP) inactivation of L. monocytogenes, Salmonella spp....
