18 datasets found

The Two Weeks in the World research project has resulted in a dataset of 3100 clinically relevant bacterial genomes with pertaining metadata, collected from 59 diagnostic units...

Central venous catheter-related bloodstream infection (CRBSI) is a huge public health concern with considerable impact on mortality and health costs. A three years observational...

CDC Division of Healthcare Quality Promotion’s BioProject for whole genome sequence data of Gram-negative bacteria

Use selective bacterial culture to understand the identity, prevalence, persistence, and transmission of MDROs contaminating hospital intensive care unit sinks and water sources...

Whole genome sequencing of bacterial isolates over a 1-year period from a hospital's intensive care units.

This project is funded by the UK National Institute for Health Research to set up a full-fledged Global Health Research Unit (GHRU) through a grant awarded to the cGPS (Centre...

Veterinary Pathogens sequenced as part of the effort to Combat Antibiotic Resistant Bacteria

Bacteria with public health implications due to virulence or antimicrobial resistance. Many of these bacteria were associated with outbreaks or have abnormal characteristics....

<b>FDA-ARGOS project update</b> <p>FDA-ARGOS database updates may help researchers rapidly validate diagnostic tests and use qualified genetic sequences to...

Nucleotide sequences including G+C contents and oligonucleotide compositions tend to be more similar between plasmid and hosts' chromosome than between the plasmid and non-host...

This project is funded by the UK National Institute for Health Research to set up a full-fledged Global Health Research Unit (GHRU) through a grant awarded to the cGPS (Centre...

Rectal carriage of mcr in pregnant women and neonates in three Nigerian state hospitals between 2015 and 2017.

The goal of this project is to identify carbapenemases and other beta-lactamases in clinical isolates with WGS and assess their mobilization potential . The results can support...

Prospective collection and sequencing of positive blood culture isolates in hospitalized adults in Cambodia

This project is related to metagenomic survey and genomic epidemiology analysis of antimicrobial resistance bacteria (in particular, carbapenem and/or beta-lactam resistant...

We have developed a bladder-specific bacterial reference database consisting of 1134 genomes to aid in genomic, functional, and experimental analyses of the human bladder...

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Bacterial strains resistant to beta-lactam antibiotics were isolated from vegetables in the United States. Shotgun metagenomic sequencing of microbiome from vegetables was...