27 datasets found

Genomic characterization of Vibrio spp. isolated from feed-based inactivated vaccine in Selangor Malaysia.

This project aims to analyze the antibiofilm activity of stylicin from shrimp Penaeus vannamei against Vibrio harveyi through comparative transcriptomics

Complete genome of Vibrio harveyi isolated from captive Caribbean Spiny Lobster (Panulirus argus)

Data in this project is grouped by category: <a href="https://data.test.argosdb.org/actinomycetes/">Actinomycetes</a>, <a...

Vibrio isolates sequenced for the FDA GenomeTrakr Project Genome sequencing and assembly

A total of 227 genomes were sequenced using Illumina HiSeq 4000, as will serve as a baseline for benchmarking various metagenomics tools. In addition, 61 other genomes used for...

A dominant strain, named LcV6, was isolated from the diseased L. crocea, specifically from their intestinal tract and ulcerated skin. This strain is highly pathogenic and...

The purpose of this sequencing was to investigate the effect of silencing of the cheA gene of Vibrio harveyi on the adhesion capacity from the transcriptome level. We interfered...

This project establishes a mucosal challenge model for Vibrio harveyi in barramundi (Lates calcarifer) using the causal pie model framework

Evaluating metagenomic software is key for optimizing metagenome interpretation and focus of the initiative for the Critical Assessment of Metagenome Interpretation (CAMI). The...

Purpose: Next-generation sequencing (NGS) has revolutionized systems-based analysis of cellular pathways. The goals of this study are to compare the gene (including sRNA)...

Vibrio harveyi Hep-2a-10 is an environmental isolate obtained from the hepatopancreas of a Pacific White Shrimp from a Texas Agrilife shrimp farm in Flour Bluff, TX, USA, 2014.

This survey isolated Vibrio species to investigate antimicrobial resistance and disease associations in sea otters. Vibrio species were isolated from various body sites living...

Vibrio species represent one of the most diverse genera of marine bacteria known for their ubiquitous presence in natural aquatic systems. Several members of this genus...

Salmonella enterica genomes sequenced as part of PulseNet USA surveillance for foodborne disease

Genomic data of five bacterial pathogens isolated from aquaculture fish (sea bream, sea bass)

Vibrio spp. genome sequencing and assembly of isolates obtained from Acropora palmata and the surrounding seawater in the Florida Keys, USA

Veterinary Pathogens sequenced as part of the effort to Combat Antibiotic Resistant Bacteria

A pathogenic Vibrio harveyi strain was isolated from the diseased pearl gentian grouper, and its whole genome was sequenced.

Study of farmed fish pathogens