23 datasets found

Bacteria with public health implications due to virulence or antimicrobial resistance. Many of these bacteria were associated with outbreaks or have abnormal characteristics....

Whole genome sequencing of wastewater isolates that do not fall into GenomeTrakr enteric or ESKAPE organisms.

Draft and complete genome sequences of foodborne bacterial pathogens collected for research purposes at the FDA's Center for Food Safety and Applied Nutrition.

Objective to study genotypic and phenotypic resistance.

Data in this project is grouped by category: <a href="https://data.test.argosdb.org/actinomycetes/">Actinomycetes</a>, <a...

'This project is funded by the UK National Institute for Health Research to set up a full-fledged Global Health Research Unit (GHRU) through a grant awarded to the cGPS (Centre...

This project is funded by the UK National Institute for Health Research to set up a full-fledged Global Health Research Unit (GHRU) through a grant awarded to the cGPS (Centre...

This project focuses on three foods of chicken meats, fishery products and vegetables. We plan to isolate Campylobacter, Salmonella and Listeria from chicken meats, Vibrio,...

The study describes a workflow to encourage the clinical utility and potential of next generation sequencing for the simultaneous detection of bacteria, fungi and antimicrobial...

Whole genome sequencing of foodborne pathogens isolated from retail seafood as part of the US Food and Drug Administration surveillance project for NARMS

Salmonella enterica genomes sequenced as part of PulseNet USA surveillance for foodborne disease

http://www.sanger.ac.uk/resources/downloads/bacteria/escherichia-coli.html This data is part of a pre-publication release. For information on the proper use of pre-publication...

University of California at Davis 100K Pathogen Genome Project. Major bacterial pathogens in the United States and around the world, including Salmonella enterica, E. coli,...

This project is funded by the UK National Institute for Health Research to set up a full-fledged Global Health Research Unit (GHRU) through a grant awarded to the cGPS (Centre...

This project is funded by the UK National Institute for Health Research to set up a full-fledged Global Health Research Unit (GHRU) through a grant awarded to the cGPS (Centre...

We analyzed the gut microbiome of WTCD (Wild type mice microbiome), KOCD (SIRT6 KO mice microbiome), WT-MT (WT mice transplanted with microbiome from WT mice), KO-MT (WT mice...

A microevolution study on the highly clonal monophasic Salmonella Typhimurium circulating massively in Europe since 2010 have been progressed on 300 genomes of Salmonella...

The aim of the proposed research is to define the nature and frequency of transfer of antimicrobial resistance (AMR) genes between pathogenic and commensal bacteria within their...

Analytical workflows based on NGS data for foodborne pathogen surveillance, outbreak detection, and epidemiological analysis will be developed during this study. General methods...

Sequences associated with validation of sequencing reagents and platforms