Two weeks in the World 2020

The Two Weeks in the World research project has resulted in a dataset of 3100 clinically relevant bacterial genomes with pertaining metadata, collected from 59 diagnostic units in 35 countries around the world during 2020. A relational database is available with metadata and summary data from select bioinformatic analysis, such as species prediction and identification of acquired resistance genes. The dataset is browsable and interactable through a web-application. This is created and shared according to the FAIR principles and has large reuse potential within the research fields of clinical microbiology and global health.

Identifier
Source https://data.blue-cloud.org/search-details?step=~012BC9836EDAD69D63AFC1C25294BB6EEC6734C7EBD
Metadata Access https://data.blue-cloud.org/api/collections/BC9836EDAD69D63AFC1C25294BB6EEC6734C7EBD
Provenance
Instrument Illumina MiSeq; NextSeq 500; GridION; ILLUMINA; OXFORD_NANOPORE
Publisher Blue-Cloud Data Discovery & Access service; ELIXIR-ENA
Publication Year 2024
OpenAccess true
Contact blue-cloud-support(at)maris.nl
Representation
Discipline Marine Science
Spatial Coverage (-113.514W, -71.927S, 170.501E, 71.555N)
Temporal Coverage Begin 2020-01-01T00:00:00Z
Temporal Coverage End 2021-03-31T00:00:00Z