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Clinical isolate sequencing
Sequencing of several clinical isolates of different species -
Environmental Surveillance of ESBL and Carbapenemase-Producing Gram-Negative ...
We investigated the presence and prevalence of ESBL- and Carbapenemase-carrying bacterial species by swabbing "high touch" areas as deduced from literature (taps, door handles,... -
Two weeks in the World 2020
The Two Weeks in the World research project has resulted in a dataset of 3100 clinically relevant bacterial genomes with pertaining metadata, collected from 59 diagnostic units... -
CDC HAI-Seq Gram-negative bacteria
CDC Division of Healthcare Quality Promotion’s BioProject for whole genome sequence data of Gram-negative bacteria -
Bacterial isolates from intensive care units
Whole genome sequencing of bacterial isolates over a 1-year period from a hospital's intensive care units. -
Genomic epidemiology and patterns of antimicrobial resistance of neonatal sep...
The level of antibiotic resistance in neonatal infections and its impact on mortality in low-middle income countries (LMICs) is unacceptably high. The study, entitled the Burden... -
Enhanced detection system for hospital associated transmission (EDS-HAT)
Whole genome sequencing of bacterial pathogens is combined with machine learning and data mining of the electronic medical record to enhance outbreak detection in hospitals and...