174 datasets found

Le pipeline sélectionné pour produire les listes floristiques utilisées pour calculer les IBD des 447 échantillons est donné ci dessous Les données fastq sont disponibles au DOI...

16S sequence fasta file of the 103 samples of the Microprung study and associated metadata

This dataset includes analysis files for the paper "Sequence Imputation from Low Density Single Nucleotide Polymorphism Panel in a Black Poplar Breeding population"

The dataset contains all the BAM files in order to reproduce the results given in the article.

This dataset contains R-scripts to analyse the diversity and composition of seed fungal communities (Fort et al. 2020. Maternal effects shape seed fungal communities in Quercus...

Information data on the diversity of bacterial communities present on 12 samples of cold smoked salmon, 18 samples of stainless steal coupons placed in a food processing...

This dataset includes the assembly and annotation of the Plasmopara viticola genome (INRA-PV221 isolate), following genome sequencing using PacBio long reads at deep coverage....

A F2 population consisting of 337 individuals was derived from the inter-specific cross of V. vinifera cv. Cabernet-Sauvignon (CS) x V. riparia cv. Riparia Gloire de Montpellier...

Interproscan annotation on the 43,718 predicted proteins in the genome of the root-knot nematode Meloidogyne incognita (Blanc-Mathieu et al. 2017, PLoS Genetics). vesrion used:...

Reads corresponding to the biological samples initially analysed in "Investigating Host Microbiota Relationships Through Functional Metagenomics" of Laville et al and used to...

A total of 93 harbour seal samples from Moray Firth (North East Scotland ) were genotyped with 25 microsatellite markers using fluorescent labelled primers (see Appendix A, B...

The yeast Saccharomyces cerevisiae is an attractive industrial host for the production of a wide range of bulk and fine chemicals, such as biofuels, flavors and fragrances or...

Accession numbers of M. incognita candidate effectors. These proteins are predicted to be secreted based on the presence of a signal peptide for secretion and absence of...

Six tomato accessions with contrasted responses to high temeprature (HT) were selected and the ovary transcriptomes of plants grown under HT and control conditions were analyzed...

Taxonomic distribution of M. incognita Diamond hits against the NCBI's nr library. The taxonomy has been determined by Diamond LCA algorithm via outformat 102. Two reports are...

This article describes how RNA expression data of 173 genes were produced on 384 sunflower hybrids grown in field conditions. Sunflower hybrids were selected to represent...

Annotated list of the 63 species used in the Orthofinder comparative analysis of nematodes (61 species) and two tardigrade species as out-groups. Description: Lines 1-64,...

After running the TEdenovo, we got a filtered library (without the SSR consensus and without the unclassified consensus if they were generated with less than 10 HSPs). We have...

To identify putative secreted proteins in the M. incognita protein set (Blanc-Mathieu et al. 2017), we searched for predicted signal peptides (SP) for secretion using SignalP v4...

The platform "GenoSol" was created by the UMR1347 AGROECOLOGIE at the INRA (French National Institute for Agronomic Research) of Dijon. This platform aimed to provide a...