Annotated list of species used in this study

DOI

Annotated list of the 63 species used in the Orthofinder comparative analysis of nematodes (61 species) and two tardigrade species as out-groups.

Description:

Lines 1-64, definition of columns

  • Abbrev Species: abbreviated species name. Species identifiers used in all the Orthofinder analysis.

  • Species: Latin species name.

  • BUSCO%: percentage of core eukaryotic proteins (odb9) found in full length by BUSCO V3 in the proteome.

  • Proteins: number of predicted proteins

  • Taxo: taxonomic group

  • Hclade: Helder Clade classification according to 'Van Megen et al. A phylogenetic tree of nematodes based on about 1200 full-length small subunit ribosomal DNA sequences. Nematology. 2009'

  • Bclade: Blaxter Clade classification according to ''

  • Lifestyle: feeding style of the species

  • Source: origin of the proteome file

  • Reference: bibliographic references associated to the species genome paper

Lines 66-108: full bibliographic refernces with Authors, Title, Journal and Year

Identifier
DOI https://doi.org/10.15454/IIAQOW
Metadata Access https://entrepot.recherche.data.gouv.fr/oai?verb=GetRecord&metadataPrefix=oai_datacite&identifier=doi:10.15454/IIAQOW
Provenance
Creator Danchin, Etienne; Grynberg, Priscila; Togawa, Roberto
Publisher Recherche Data Gouv
Contributor Danchin, Etienne
Publication Year 2020
Rights etalab 2.0; info:eu-repo/semantics/openAccess; https://spdx.org/licenses/etalab-2.0.html
OpenAccess true
Contact Danchin, Etienne (INRA - Institut National de la Recherche Agronomique)
Representation
Resource Type Text; Dataset
Format text/plain
Size 20957
Version 1.1
Discipline Geosciences; Life Sciences; Ecology; Plant Science; Biology; Omics