40 datasets found

Water and sediment samples collected from coastal marine ecosystems across Indonesia to assess the biodiversity and structure of protist communities in the Indo-Pacific.

In the present study, we investigate the identity and abundance of diazotrophs within sediments collected along distance gradients from inside to outside six cold seeps from two...

We generated metabarcoding data to characterise the microbiomes associated with stony coral mucus, soft coral mucus, macroalgae biofilm, sponge tissue, exudates, and aquarium...

The specific aim of this research was to characterize the temporal response of hyperarid soil AD microbial communities to an ex situ simulated rainfall event without nutrient...

A systematic analysis of the most commonly amplified 18S rRNA hypervariable regions and the effect that PCR/sequencing bias has on community representation. The V4 and V8-V9...

Simulated microbial communities of Trichodesmium and heterotrophic bacteria from Gulf of Aqaba, Eilat, Israel

Read cloud sequencing and assembly of the human gut microbiome One marine sediment metagenome and one synthetic metagenome were included as validation and proof-of-concept of a...

This study examines monthly dynamics of marine microbial community between Jan-2005 and July-2018 from two size fractions (0.2-1.2 um and 1.2-80 um) at the San Pedro Ocean...

This study evaluates the diversity and activity of marine archaea via 16S rRNA gene and transcript sequencing. This method is complementary to evaluation of the activity of...

DNA metabarcode data derived three bulk specimen and 19 bulk soil samples collected from 11 sites across Canada.

Bacterial community in lyophilized roots of wild-growing sea beet was assessed by means of 16S rRNA sequencing

Coral skeletons record the past environmental signals. Microbiome based on SSU rRNA genes were investigated in the coral skeleton, which obtained from Tuvalu and recorded annual...

This study primarily evaluates the monthly dynamics of the marine microbial community at the San Pedro Ocean Time-series station (SPOT near Los Angeles, CA, USA). Other marine...

Here, we report a dataset capturing the diversity and dynamics of the eukaryotic community at a 16 km stretch of the the Baltic Sea coast and the Warnow river estuary. From...

Fish are the most diverse and widely distributed vertebrates, yet little is known about the microbial ecology of fishes nor the biological and environmental factors that...

from a manuscript in prep: "Viruses are thought to influence microbial community structure by density-dependent, host-specific infection, which can be strain-specific....

Marine diazotrophs play a key role in determining ecosystem productivity by alleviating nitrogen limitation. However, we know little about the identity and activity of...

Rain events increase Tijuana river flow to levels that the international water treatment plant in the Mexico-US border can not process. Therefore, rain runoff and sewage...

Six DNA extraction methods were tested in pure cultures of different nano and picoplankton species. The same extractions were checked in non-axenic mock communities formed...

Organisms rely on a network of microbes that seed the host body and are maintained via a shared relationship which is often times a consortial symbiosis. Marine invertebrates,...