This study will include priority foodborne pathogens and investigate different methods, based on NGS data, of analysing and clustering these for the purpose of improved surveillance.

Analytical workflows based on NGS data for foodborne pathogen surveillance, outbreak detection, and epidemiological analysis will be developed during this study. General methods will be developed for sequence based surveillance, methods for support of outbreak investigations and finally epidemiological analysis including source attribution studies.

Identifier
Source https://data.blue-cloud.org/search-details?step=~0125BCA20DFAC1A840F65CAEF5EFBF46DB049CF607F
Metadata Access https://data.blue-cloud.org/api/collections/5BCA20DFAC1A840F65CAEF5EFBF46DB049CF607F
Provenance
Publisher Blue-Cloud Data Discovery & Access service; ELIXIR-ENA
Publication Year 2025
OpenAccess true
Contact blue-cloud-support(at)maris.nl
Representation
Discipline Marine Science
Temporal Coverage Begin 1997-01-01T00:00:00Z
Temporal Coverage End 2018-01-01T00:00:00Z