174 datasets found

Diatoms (Bacillariophyta) are ubiquitous microalgae which produce a siliceous exoskeleton and which make a major contribution to the productivity of oceans and freshwaters. They...

Dataset overview This dataset provides: a non-redundant high-quality catalog of 8.4 million genes 853 Metagenomic Species Pangenomes (MSPs) This dataset can be used to...

Open and shared thesaurus covering INRAE's research fields. It serves as a repository within the institute to index and annotate documents, web pages, activity descriptions and...

Genotyping matrix of a collection of 354 dent maize inbred lines corresponding to the "Public Amaizing Dent Panel". This panel includes: (i) 254 dent inbred lines from "Drops...

Dataset overview This dataset provides: the updated Integrated Gene Catalog of the human gut microbiota (aka IGC2) 1,989 Metagenomic Species Pangenomes (MSPs) This dataset...

The project aimed to build a virtual tomato fruit that enables the prediction of metabolite levels given genetic and environmental inputs, by an iterative process between...

The data management plan of the infrastructure concerns three types of data: • Data-U: user data stored on working spaces assigned to user and project accounts. •...

This dataset includes generated genome annotation for the 17 strains as Data S1, and comparative statistics and orthogroup analyses for these genomes, performed using...

In the context of the FeMAI project (Federated Microbiome AI for human health), this dataset was created to assess various machine learning classification methods for colorectal...

R code used to perform the network inference and analysis of "Microbial networks inferred from environmental DNA data for biomonitoring ecosystem change: strengths and pitfalls"

These scripts implement the combined test for feature selection in a multi-class comparison from data with missing values, presented in Plancade, Berland et al (2022). The test...

This dataset provides the results of two systematic large-scale yeast two-hybrid screenings of the Arabidopsis thaliana InterATOME library with the Arabidopsis...

The plasma's proteomics data obtained from Holstein cows treated with abomasal infusions of coconut oil (CTRL) or a mixture of essential fatty acids and conjugated linoleic...

General statistics of the orhofinder analysis on the 63 species (including 61 nematodes). Number of orthogroups, of genes in orthogroups etc...

This dataset corresponds to the data and code associated to the study: "Improving genomic predictions with inbreeding and non-additive effects in two admixed maize hybrid...

Raw and annotated Orthofinder results on 61 nematode and 2 tardigrade (used as outgroup) species. The annotated list of species with description of the abbreviated names is...

Impact of atmospheric stresses on clouds microorganisms metabolism: the case of H2O2 Dataset: The dataset contains 32 files created from 500MHz NMR spectrometer and cdf files...

Negative mode LC-MS metabolomic profiling of 15 DPA, 20 DPA, 25 DPA and Red Ripe fruit pericarp from the WT, gbp1-c4 and gbp1-c8 independent mutant lines of tomato.

Description des 3 fichiers csv : - list_morph.csv : Fichier csv donnant les listes floristiques diatomées obtenues en microscopie optique. - list_biomol.csv : Fichier csv...

Plan de gestion des données de l'UMR INRAE BIOGECO Ce document explicite la manière dont sont obtenues, documentées, analysées, disséminées et archivées les données produites...