111 datasets found

Open and shared thesaurus covering INRAE's research fields. It serves as a repository within the institute to index and annotate documents, web pages, activity descriptions and...

Données sur les traits phénotypiques de Pinus pinea mesurés dans les jardins communs du réseau INRAE de génétique forestière pour la recherche et l'expérimentation (GEN4X). Ce...

The project aimed to build a virtual tomato fruit that enables the prediction of metabolite levels given genetic and environmental inputs, by an iterative process between...

Data and codes for reproducing the MCMC inferences, tables and the main figures described in Kwame Adrakey et al. 2023. Bayesian inference for spatio-temporal stochastic...

It is widely accepted that climate has an essential influence on the distribution of species and that temperature is the major abiotic factor that affects their life-history...

General statistics of the orhofinder analysis on the 63 species (including 61 nematodes). Number of orthogroups, of genes in orthogroups etc...

Raw and annotated Orthofinder results on 61 nematode and 2 tardigrade (used as outgroup) species. The annotated list of species with description of the abbreviated names is...

Using cross-disciplinary approaches to characterize the plant core microbiome, we assessed the diversity and composition of leaf-associated fungal and viral communities from...

This Amplicon Sequence Variant (ASV) table was obtained by metabarcoding foliar fungal communities in conventional and organic vineyards. This table was generated after the...

Bioinformatic scripts used to sort, filter and analyze fungal raw sequence data obtained by metabarcoding foliar, bark and ground cover samples collected in an untreated...

This data article contains annotation data characterizing Multi Criteria Assessment Methods proposed in the scientific literature by INRA researchers.

MATLAB codes for reproducing the simulations and main figures described in Fabre et al. 2022. An epi-evolutionary model for predicting the adaptation of spore-producing...

This version OntoBiotope-BioNLP-OST is a subset of the OntoBiotope ontology. created for the Bacteria Biotope task of BioNLP-OST 2019 competition. OntoBiotope is an ontology of...

Meloidogyne incognita protein-coding genes differentially expressed at four stages during the parasitic life cycle: - eggs - pre-parasitic second stage juvenile (J2) - mix of...

Analysis of differentially represented (over and under) Gene Ontology (GO) terms in the genes showing significant up-regulation at the transition between the the pre-parasitic...

This Dataset contains the blueprints and the instructions to build-up a high-throughput device for Lepidoptera larvae feeding bioassays

We present a new de-novo whole-genome assembly obtained from a high quality DNA extraction and long-reads sequencing Nanopore technology obtained from an isolate sampled in the...

Supplementary tables to manuscript in Chapter 3.

This dataset includes the sequence and SNP data, and the scripts for detecting SNP from targeted sequences isolated from the Erysipe alphitoides draft genome. The draft genome...

This study aims at comparing the performance of two viral sequence enrichment approaches, double-stranded RNA (dsRNA) and Virion-associated nucleic acids (VANA) purification for...