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Bulk sediment characteristics and geomicrobiology of sediment core 5022-1J fr...
Living microorganisms inhabit every environment of the biosphere but only in the last decades their importance governing biochemical cycles in deep sediments has been widely... -
Microbial community level physiological profiles
Microbial activity measured using MicroResp in bulk and rhizospheric soil, at six altudinal levels along an elevation gradient at Massif de Belledonne, France -
Quantifying anthropogenic effect on S. cerevisiae vineyard metapopulation div...
This dataset contains all genotypes files used in the manuscript for various genetic analyses. -
Adaptation of S. cerevisiae to fermented food environments reveals remarkable...
Different Variant data set combining genotypic data data from the newly sequenced strains and data from available genomes sequences obtained at SGD. Data at vcf format or at... -
Microbial networks inferred from environmental DNA data for biomonitoring eco...
R code used to perform the network inference and analysis of "Microbial networks inferred from environmental DNA data for biomonitoring ecosystem change: strengths and pitfalls" -
Factors influencing the heterogeneity of benthic diatom communities inside na...
This .xlsx file gives the raw data used for the analyses of the paper entitled "Factors influencing the heterogeneity of benthic diatom communities inside natural alpine lakes"... -
Absolute quantitation of microbes using 16S rRNA gene metabarcoding: a rapid ...
Metabarcoding of the 16S rRNA gene is commonly used to characterize microbial communities, by estimating the relative abundance of microbes. Here we present a method to retrieve... -
Bioindication diatomées en Guyane française : comparaison microscopie et méta...
Description des 3 fichiers csv : - list_morph.csv : Fichier csv donnant les listes floristiques diatomées obtenues en microscopie optique. - list_biomol.csv : Fichier csv... -
Raw data for "Phenotypic heterogeneity can be triggered by the molecular swit...
Zip archive including : - files Data Fig1.xlsx ... Data Fig5.xlsx which contain data used for figures 1 to 5 of the paper - directory CytoFile which contains raw cytometric data... -
TWS enrichment sequencing data archive
Raw sequencing data associated with a paper. Enrichment of a termite-originated bacterial community in bioreactor under anareobic conditions, with wheat straw as sole carbon... -
Life-forms, cell-sizes and ecological guilds of diatoms in European rivers
Diatoms are a very diverse group of microalgae that encompass about 100 000 taxa. This makes an excellent bioindicator especially of rivers. The majority of biotic indices based... -
Effect of fermentation conditions on the viability and acidification activity...
This dataset concerns the study of the effect of three fermentation parameters (temperature, pH and harvest time) on the viability (cell counts) and acidification activity... -
Viral metagenomic and fungal ITS metabarcoding data from complex pools of pla...
Using cross-disciplinary approaches to characterize the plant core microbiome, we assessed the diversity and composition of leaf-associated fungal and viral communities from... -
A catalog of genes and species of the human oral microbiota
A catalog of genes and species of the human oral microbiota -
Amplicon Sequence Variant (ASV) table obtained by metabarcoding foliar fungal...
This Amplicon Sequence Variant (ASV) table was obtained by metabarcoding foliar fungal communities in conventional and organic vineyards. This table was generated after the... -
Bioindication diatomées : comparaison microscopie / barcoding ADN. Listes flo...
Description des 3 fichiers excels : DREAL 2016_2017 liste taxonomique microscopie_moleculaire.xlsx : Fichier excel donnant les listes floristiques diatomées des campagnes 2016... -
Bioinformatic scripts used to analyze fungal metabarcoding data obtained from...
Bioinformatic scripts used to sort, filter and analyze fungal raw sequence data obtained by metabarcoding foliar, bark and ground cover samples collected in an untreated... -
Different patterns in leaf-associated viromes and mycobiomes of wild plant po...
Supplementary methods and tables of Annexe 2: Different patterns in leaf-associated viromes and mycobiomes of wild plant populations between cultivated and natural ecosystems -
Annotation data about Multi Criteria Assessment Methods used in the agri-food...
This data article contains annotation data characterizing Multi Criteria Assessment Methods proposed in the scientific literature by INRA researchers. -
Code for the article "An epi-evolutionary model to predict spore-producing pa...
MATLAB codes for reproducing the simulations and main figures described in Fabre et al. 2022. An epi-evolutionary model for predicting the adaptation of spore-producing...