Enriched GO terms in predicted dorsal gland effectors

DOI

By cross referencing the list of M. incognita proteins having a predicted signal peptide for secretion and no predicted transmembrane region with the list of proteins encoded by genes with Mel-DOG motifs in their upstream regions, we could predict 457 candidate dorsal gland (DG) effectors in the genome. We used the functional annotation produced by InterProScan to search for enriched GO terms in these predicted DG effectors using GOfuncR.

Identifier
DOI https://doi.org/10.15454/2O77EF
Metadata Access https://entrepot.recherche.data.gouv.fr/oai?verb=GetRecord&metadataPrefix=oai_datacite&identifier=doi:10.15454/2O77EF
Provenance
Creator Danchin, Etienne; Péré, Arthur; Eves-van den Akker, Sebastian; Bournaud, Caroline
Publisher Recherche Data Gouv
Contributor Danchin, Etienne
Publication Year 2021
Rights etalab 2.0; info:eu-repo/semantics/openAccess; https://spdx.org/licenses/etalab-2.0.html
OpenAccess true
Contact Danchin, Etienne (INRA - Institut National de la Recherche Agronomique)
Representation
Resource Type Dataset
Format text/tab-separated-values; text/plain
Size 2761; 8225; 78214
Version 1.1
Discipline Life Sciences; Plant Science; Biology; Omics