40 datasets found

rock-inhabiting microbial communities

A primary objective is to determine the microbiology of the lower oceanic crust at Atlantis Bank, Indian Ocean

All animals live in close association with bacteria, but for most hosts little is known about the distribution and host-specificity of these bacteria. We used amplicon...

This study utilized the Earth Microbiome Project primers 515f-806r with Illumina MiSeq (2x300) sequencing to assess the microbial community structure of deep sea basalts from a...

Characterization of the microbial community that remained firmly attached on the packing material and in solution of an anoxic lab scale biotrickling filter removing Volatile...

Limestone caves have relatively stable temperatures and humidity throughout the year but due to nutrient and energy limitations are considered to be extreme habitats,...

tufA metabarcoding assays for algal biodiversity studies (amplicon metagenomic)

In 2016, IODP-ICDP Expedition 364 recovered an 829-meter-long core within the peak ring of the Chicxulub impact crater (Yucatan, Mexico), allowing us to investigate the...

Investigating the microbiomes associated to glacier-fed streams around the world

Study of microbial communities associated with ferromanganese nodules

This study was conducted to examine the ecological succession of microbial phototrophs within intertidal carbonates. We wanted to examine if anoxygenic phototrophs act as...

This project contains a survey of intertidal and benthic carbonate endoliths from the coast of Isla de Mona, Puerto Rico. We amplified the 16S rRNA gene from samples that had...

Calcretes are most associated with arid and semiarid environments and are frequently used as a proxy for such environments in the geologic record however, they are also known to...

One of the main goal of this project is the characterization of diverse microbial communities that inhabit the Atlantis Massif serpentine rocks. To overcome sequencing...

The kleptoplastidic sea slug Plakobranchus cf. ianthobapsus is the only known herbivore of the invasive alga Avrainvillea lacerata in the Hawaiian Islands. Metabarcoding of the...

Here we present qualitative data related to the microbial inventory from 33 deeply buried basaltic rocks collected at two different locations, penetrating 300 vertical meters...

Marine macroalgae (i.e. seaweeds) are coastal foundation species, colonized by diverse and variable microbial communities. Microbes influence macroalgal health and ecosystem...

Seaweed-associated microbiota are essential for the health and resilience of nearshore ecosystems, marine biogeochemical cycling, and host health. Yet much remains unknown about...

Raw ONT reads obtained by in-situ metagenomic sequencing in

Endolithic microbiomes have not be extensively surveyed using high-throughput sequencing techniques. The goal of this study was to examine the microbial composition of the...