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Analyse dose response for gene expression and phenotype
The rise of high-throughput methods has allowed for screens with millions of single compounds and thousands of (binary) compound combinations. Investigating compounds in... -
Gene expression by the cold-water octocoral Dentomuricea aff. meteor during a...
We report the results of an aquaria-based experiment testing the effects of suspended particles generated during potential mining activities, on a common habitat-building coral... -
Stress biomarkers in the cold-water octocoral Dentomuricea aff. meteor during...
We report the results of an aquaria-based experiment testing the effects of suspended particles generated during potential mining activities, on a common habitat-building coral... -
Metabolic rates of the cold-water octocoral Dentomuricea aff. meteor during a...
We report the results of an aquaria-based experiment testing the effects of suspended particles generated during potential mining activities, on a common habitat-building coral... -
Metal bioaccumulation by the cold-water octocoral Dentomuricea aff. meteor du...
We report the results of an aquaria-based experiment testing the effects of suspended particles generated during potential mining activities, on a common habitat-building coral... -
Metal concentrations in seawater of an ex-situ experiment with the cold-water...
We report the results of an aquaria-based experiment testing the effects of suspended particles generated during potential mining activities, on a common habitat-building coral... -
Aquarium monitoring of an ex-situ experiment involving the cold-water octocor...
We report the results of an aquaria-based experiment testing the effects of suspended particles generated during potential mining activities, on a common habitat-building coral... -
Suspended sediment concentrations of an ex-situ experiment with the cold-wate...
We report the results of an aquaria-based experiment testing the effects of suspended particles generated during potential mining activities, on a common habitat-building coral... -
Results of an ex-situ experiment testing the effects of mining-generated sedi...
We report the results of an aquaria-based experiment testing the effects of suspended particles generated during potential mining activities, on a common habitat-building coral... -
Experimental phosphate limitation in Nodularia spumigena CCY9414
Nodularia spumigena is a toxic, filamentous cyanobacterium capable to fix atmospheric nitrogen, which is often dominating cyanobacterial bloom events in the Baltic Sea and other... -
Supporting Data for: Calanus finmarchicus hydrolysate improves growth perform...
This data set contains the gene expression results (RT-PCR) from an experiment that aimed to investigate the growth-promoting properties of a novel protein hydrolysate of the... -
Replication Data for: Gene expression changes in ducklings exposed in ovo to ...
This dataset contains the data required to reproduce the analysis and the figures in the paper: Gene expression changes in ducklings exposed in ovo to emerging... -
Replication Data for: Changes in DNA Methylation During Anoxia and Reoxygenat...
This analysis contained the identification of DNA methylation sites in the context of CpG islands and differentially methylated regions (DMRs) with MethylScore. Further the mRNA... -
HSmice.tar.gz
Genotypes, phenotypes and gene expression of 2000 heterogeneous stock mice. These are previously published data (10.1101/gr.088120.108, combined together as used in the study... -
<b>Supplemental Files for the paper "The distinct roles of genome, methylatio...
The archive contains Genome annotation data from the paper “The distinct roles of genome, methylation, transcription, and translation on protein expression in Arabidopsis... -
Dataset for raw data of the publication of Estelle Bineau et al (2022) "Inher...
The dataset contains raw data associated to the publication "Inheritance of Secondary Metabolites and Gene Expression Related to Tomato Quality ", Bineau et al (2022) Int J... -
Expression and gene network datasets for benchmarking phenotype prediction
Companion simulated dataset for the preprint "Should we really use graph neural networks for transcriptomic prediction?" together with data obtained from the datasets:... -
RT-qPCR Data (raw, merged, normalized and analyzed) associated to " Contribut...
All RT-QPCR data generated during the infection of Galleria mellonella larvae with TBS buffer (TBS), Staphylococcus aureus HG003 (SA), EVs produced by Staphylococcus aureus... -
Bovine embryo gene profiles
Gene Set Enrichment Analyses (GSEA) and Differentially Expressed Genes (DEG) defining the molecular profiles of bovine blastocysts produced in vitro -
Associations between genetic variants and gene expression in porcine blood
The transcriptome can be used as an intermediary phenotype in the search for biomarkers. In the present study we aimed to find associations between genomic variability and gene...
