163 datasets found

Comparing the various de novo assembly tools for plasmid metagenome analysis using fish farm water samples

Metagenome data from sediment samples in the Oskarshamn harbor

Genome sequencing of microbial communities from Cheepsake Bay to study organic matter cycling in a time-series

Thc. marina is a phototrophic purple bacterium known for its role in sulfur oxidation and bioremediation in marine aquaculture systems. We present a draft genome of Thc. marina...

Aquatic ecosystems significantly influence global biodiversity and ecological processes. To unravel the mysteries of microbial communities within these ecosystems, we conducted...

Sequencing libraries were prepared by random fragmentation of DNA samples, which were sequenced on an Illumina NovaSeq 6000 platform (Illumina Inc., San Diego, CA) using 150 bp...

The GeoMICS project (Genome-Enabled Ocean Microbiology Integrated with Chemical Surveys) focuses on changes in microbial diversity, community functions, and chemical features...

Genome sequencing of microbial communities from Cheepsake Bay to study organic matter cycling in a time-series

Analyze the composition and diversity of nitrifying microbes in shrimp culture systems

Water samples were collected at >500 coastal sites around Japanese Archipelago in June, July and August of 2017. Collected water samples were filtered with Sterivex (0.45 um...

The goal of this project was to develop an environmental DNA survey for metazoans in commercial ports to infer global biodiversity patterns and detect nonindigenous species.

Bacterial (and some archaeal) V3V4 sequences collected at the Linnaeus Microbial Observatory (LMO) in the Baltic Sea 2014-15 using three different filter setups: directly on 0.2...

The Indo-Pacific Warm Pool (IPWP) plays a pivotal role in global climate regulation and is integral to marine nutrient and carbon cycling. However, the mechanisms by which the...

Microbiome of the clam gut and surrounding environment 16S of Miseq sequencing

Rivers are important transport systems for nutrients and organic material and thus influence biogeochemical cycles and food web structures. Microorganismal biodiversity is an...

The mic gene sequences of water samples collected from QCS Reservoir.

Nitrogen (N2) fixation rates in the brackish Baltic Sea are among the highest per unit of area in the world. However, beyond the filamentous heterocyst-forming cyanobacteria,...

to provide a data for viral metagenomic diversity in Brown tide in QHD in spring

Marine planktonic communities are pivotal for ecosystem functions, but sensitive to environmental changes. The coastal aquaculture plays a crucial role in carbon and nutrient...

Genome sequencing of microbial communities from Cheepsake Bay to study organic matter cycling in a time-series