87 datasets found

The spatial transcriptome data has allowed us to explore the differential gene expression among the oral-aboral domains and provided new insights into the apical organ...

Bilaterian animals differ from other metazoans in their apparent bilateral symmetry and the development of a third germ layer. Both might have facilitated the evolution of the...

3 biological replicates of lab-reared Nematostella vectensis eggs were used to generate total RNA. Total RNA was split into 2 samples and subjected to either ribodepletion using...

RNA-sequencing of Nv1 knockdown

MicroRNAs of bilaterian animals undergo posttranscriptional modifications such as methylation, tailing and trimming that regulate miRNA stability and function. To gain insight...

RNAseq was performed on NvLsd1 mutants and controls (consisting of NvLsd1GFP/- and NvLsd1GFP/GFP animals) in quadruplicate at two different developmental stages: 4 day-old late...

This study sampled wildtype stages throughout development and two sexually mature adult sexes.

This is a study of novel genes in nematosomes

Amplicon sequencing of Nv1 region for both DNA and cDNA samples across 3 collecting periods for several individual Nematostella vectensis animals.

Isolated mesenteries from MHC::mCherry Adults were used to generate FACS-sorted RNA sequencing libraries in order to characterize gene use in Cnidarian smooth muscle. Transgenic...

Identification of beta-catenin response genes in Nematostella vectensis embryos

In this study, we starved adult Starlet sea anemones (Nematostella vectensis) for 30 days and compared their gene expression profiles to the profiles of well-fed adult anemones....

We performed single-cell transcriptome analysis (using 10x genomics 3' scRNA-seq v3.1 chemistry) in the sea anemone Nematostella vectensis (Cnidaria). Overall design: Several...

RNA-sequencing</p><p>of NvPrdm14d::GFP-expressing cells

Comparative recolonization of adult Nematostella polyps a with three development-specific microbiomes isolated from Nematostella for identification of differentially regulated...

This project collects the genomic and transcriptomic data generated for Nematostella vectensis to facilitate genome assembly and annotation as part of the Darwin Tree of Life...

siRNA-mediated knockdown of Nematostella vectensis Gcm followed by RNA-seq analysis to identify the targets of the TF

Short read Illumina single end 50 base pair transcript data from six times points in N. vectensis development, including two biological replicates.

Nematostella vectensis embryos were cultured at 18C in 1/3 artificial sea water and sampled at 24, 48, 72, 96, 120, 144, 168, &amp 192 hours post fertilization. RNAseq was...

Previous studies have described circadian and diel gene expression patterns in this species under lab culture conditions (pyrex dishes, 12h light-dark cycle). This study...