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Deep enzymology data related to Dukatz et al.: Complex DNA sequence readout m...
Experimental procedures: Libraries of double stranded DNA substrates with CpG, CpH or CpN sites in randomized sequence context were methlyated by DNMT3B. Reactions were stopped... -
Deep enzymology data related to Adam et al.: DNA sequence-dependent activity ...
Methylation of random flank substrates: Libraries of double stranded DNA substrates with unmethylated or hemimethylated CpG sites in randomized sequence context were methlyated... -
Deep enzymology data related to Gao et al.: Comprehensive structure-function ...
Experimental procedures: Libraries of double stranded DNA substrates with CpG, CpH or CpN sites in randomized sequence context were methlyated by DNMT3A or DNMT3B. Reactions... -
Kinetic modeling of enzymatic cephalexin synthesis with neural ODEs and surro...
α-Amino ester hydrolases (AEHs) offer a promising route to the stereoselective synthesis of β-lactams such as cephalexin. However, published kinetic studies have encountered... -
Code and Data for: "Bioinspired Morphology and Task Curricula for Learning Lo...
This repository includes the data and the code of the (soon to be published) paper: "Bioinspired Morphology and Task Curricula for Learning Locomotion in Bipedal Muscle-Actuated... -
Software and Data for: Interactive delineation and quantification of anatomic...
This dataset contains the supplemental materials, the used tools, and the release of the software presented in the paper Interactive delineation and quantification of anatomical... -
arm26 Version for: Closed-Loop Coupling of Both Physiological Spindle Model a...
Version of the arm26 model (https://doi.org/10.18419/DARUS-2871) used in the study 'Closed-loop coupling of both physiological spindle model and spinal pathways for sensorimotor... -
Raw data for: The knowledge driven DBTL cycle provides mechanistic insights w...
Dopamine is a promising organic compound with several key applications in emergency medicine, diagnosis and treatment of cancer, production of lithium anodes, and wastewater... -
Data for: Mechanistic Modeling of In Vivo Translation in Escherichia coli Rel...
The DaRUS repository entails and supplements the simulation data, MATLAB model and graphics for the publication: "Mechanistic Modeling of In Vivo Translation in Escherichia coli... -
Data related to Panzer: A Machine Learning Based Approach to Analyze Supersec...
This entry contains the data used to implement the bachelor thesis. It was investigated how embeddings can be used to analyze supersecondary structures. Abstract of the thesis:... -
MD Simulations with PRDM9
This data collection contains additional data related to Graf et al.: "Investigation and design of the dual specificity of the PRDM9 protein lysine methyltransferase". This... -
Data for: Lagrangian Sensor Particles for detecting hydrodynamic heterogeneit...
This DaRUS repository entails the raw files and result files (excluding MATLAB code files, see Gitlab repository including documentation) for the publication "Lagrangian Sensor... -
Data for: Scaling-up the Bioconversion of Lignin to 2,4-Pyridinedicarboxylic ...
Raw experimental data for the research article: "Scaling-up the Bioconversion of Lignin to 2,4-Pyridinedicarboxylic Acid With Engineered Pseudomonas putida for Bio-Based... -
NGS data related to Sogl et al. "Systematic analysis of specificities and fla...
Analysis of flanking sequence preference with a randomized substrate and bioinformatic data For analysis of the flanking sequence preference, substrate with different target... -
Supplementary Data for 'Vastly different energy landscapes of the membrane in...
Simulation files, molecular structures and trajectories, and jupyter notebooks used for analysis underlaying our publication on membrane insertion of monomeric gasdermin D to E.... -
Data for: Feather keratin in Pavo cristatus: A tentative structure
Supplementary materials for the scientific study on “Feather keratin in Pavo cristatus: A tentative structure”. The Dataset consists of .pdb files obtained by AlphaFold. Avian... -
Replication Data for: Emergence of Chemotactic Strategies with Multi-Agent Re...
Scripts used in the experiments and analysis presented in the paper. -
Getting the right clones in an automated manner: an alternative to sophistica...
In recent years, the Design-Build-Test-Learn (DBTL) cycle has become a key concept in strain engineering. Modern biofoundries enable automated DBTL cycling using robotic... -
Data for: Pros and cons of airlift and bubble column bioreactors: How interna...
The DaRUS repository entails the simulation data for the publication "Pros and cons of airlift and bubble column bioreactors: How internals improve performance". Gas... -
Repository for "A spinal network of proprioceptive reflexes can produce a var...
This dataset contains the files for "A spinal network of proprioceptive reflexes can produce a variety of bipedal gaits" (E.K. Bunz, D.F.B. Haeufle, S. Schmitt, T. Geijtenbeek,...
