Data for: Feather keratin in Pavo cristatus: A tentative structure

DOI

Supplementary materials for the scientific study on “Feather keratin in Pavo cristatus: A tentative structure”.

The Dataset consists of .pdb files obtained by AlphaFold. Avian F-keratin sequences of Pavo, Gallus and Larus spec. were comparatively analyzed for prediction and visualization of representative 3D structures of N-block and C-block F-keratin precursors as recently proposed by P. Russ, H.O.K. Kirchner, H. Peterlik & I.M. Weiss. Corresponding Ramachandran analyses of calculated Pavo F-keratin N-block and C-block, included here as graphical plots and CSV files of Phi (φ) and Psi (ψ) angles, agree with previously published experimental data. Tables are included for comparison of experimental SAXS and calculated structural features of previous and new F-keratin models, with a focus on X-ray diffraction data and density calculations. The Dataset contains relevant computational settings and describes the methodological workflow, especially for GROMACS simulations. A MPEG-4 Video file is included which shows a truncated version of Pavo F-keratin in water. This result confirms that the proposed protein folding and assembly mechanism would, in principle, be compatibel with tilting and stability of amorphous F-keratin filament precursors, a mandatory prerequisite for solidification into a biogenic super-alloy.

Identifier
DOI https://doi.org/10.18419/DARUS-4451
Related Identifier IsCitedBy https://doi.org/10.1101/2024.09.08.611866
Related Identifier IsCitedBy https://doi.org/10.12688/f1000research.157679.1
Metadata Access https://darus.uni-stuttgart.de/oai?verb=GetRecord&metadataPrefix=oai_datacite&identifier=doi:10.18419/DARUS-4451
Provenance
Creator Russ, Peter ORCID logo; Kirchner, Helmut O. K.; Peterlik, Herwig ORCID logo; Weiss, Ingrid M. (ORCID: 0000-0002-7345-341X)
Publisher DaRUS
Contributor Weiss, Ingrid; Russ, Peter
Publication Year 2024
Funding Reference University of Stuttgart ; Carl Zeiss Foundation CZS Perspektiven / P2019-02-004
Rights CC BY 4.0; info:eu-repo/semantics/openAccess; http://creativecommons.org/licenses/by/4.0
OpenAccess true
Contact Weiss, Ingrid (Universität Stuttgart, Institute of Biomaterials and Biomolecular Systems (IBBS))
Representation
Resource Type Dataset
Format application/vnd.palm; application/octet-stream; image/png; text/plain; video/mp4; application/pdf; application/vnd.openxmlformats-officedocument.spreadsheetml.sheet; text/tab-separated-values
Size 247450; 300359; 238799; 86195; 616995; 608629; 1045; 980; 981; 118380; 114352; 510370; 206112; 1503; 500446; 183934; 25875261; 119112; 163071; 487105; 205026; 163853; 10321; 10114; 18062; 5650
Version 2.0
Discipline Basic Biological and Medical Research; Biology; Computer Science; Computer Science, Electrical and System Engineering; Engineering Sciences; Life Sciences; Materials Science; Materials Science and Engineering; Medicine; Natural Sciences; Physics; Structural Biology
Spatial Coverage University of Stuttgart; University of Vienna