Comparison of samples and mock communities amplified with single-base variations in 515-Forward universal primer

This study is a comparison of marine environmental and marine mock community samples amplified with different versions of a commonly used universal forward primer 515. A mismatch in the 4th position in the 515F primer to the Thaumarchaea was corrected by replacing the (C) in that position with an ambiguity (N).

Identifier
Source https://data.blue-cloud.org/search-details?step=~012AFED029EC95E083B961079D2BE96660A75C102D3
Metadata Access https://data.blue-cloud.org/api/collections/AFED029EC95E083B961079D2BE96660A75C102D3
Provenance
Instrument Illumina MiSeq; ILLUMINA
Publisher Blue-Cloud Data Discovery & Access service; ELIXIR-ENA
Contributor UNIVERSITY OF SOUTHERN CALIFORNIA
Publication Year 2024
OpenAccess true
Contact blue-cloud-support(at)maris.nl
Representation
Discipline Marine Science
Spatial Coverage (-118.400W, 33.550S, -118.400E, 33.550N)
Temporal Coverage Begin 2009-02-18T00:00:00Z
Temporal Coverage End 2015-12-31T00:00:00Z