Survey of cryptic unstable transcripts in yeast

We sequenced both the stable (WT) and unstable (rrp6delta) transcriptomes of three S.cerevisiae strains: S288c, S1278b, JAY291 and the S.paradoxus strain N17 for de novo annotation of cryptic unstable transcripts (CUTs). Doing so we have greatly expanded on previous CUTs which were limited to the S.cerevisiae strain S288c and have provided the first assessment of CUT expression conservation in yeast Overall design: Examination of polyadenylated RNA populations between wildtype and nuclear exosome mutant rrp6delta yeast cells in biological replicates

Identifier
Source https://data.blue-cloud.org/search-details?step=~012113B95265094FAD0434A90BE41DF29D4966DD531
Metadata Access https://data.blue-cloud.org/api/collections/113B95265094FAD0434A90BE41DF29D4966DD531
Provenance
Instrument Illumina HiSeq 2000; ILLUMINA
Publisher Blue-Cloud Data Discovery & Access service; ELIXIR-ENA
Contributor Dowell lab, Molecular, Cellular and Developmental Biology, University of Colorado Boulder
Publication Year 2024
OpenAccess true
Contact blue-cloud-support(at)maris.nl
Representation
Discipline Marine Science
Temporal Point 2016-05-24T00:00:00Z