Confident datasets of client, driver and negative proteins in liquid-liquid phase separation

DOI

Proteins can form biomolecular condensates in a process called liquid-liquid phase separation (LLPS). These condensates can be formed by many proteins with different roles, either leading its formation (drivers) or being participants (clients). Many databases are developed to collect LLPS proteins but the level of annotations widely varies between them, preventing fair benchmarks and specific predictive tools. The datasets here deposited are generated by rationally filtering the most relevant LLPS resources that eventually integrate confident annotations of client, driver and negative proteins in the LLPS framework.

Identifier
DOI https://doi.org/10.34810/data1082
Metadata Access https://dataverse.csuc.cat/oai?verb=GetRecord&metadataPrefix=oai_datacite&identifier=doi:10.34810/data1082
Provenance
Creator Pintado Grima, Carlos (ORCID: 0000-0002-8544-959X); Bárcenas, Oriol ORCID logo; Iglesias, Valentín ORCID logo; Burdukiewicz, Michał (ORCID: 0000-0001-8926-582X); Ventura, Salvador ORCID logo
Publisher CORA.Repositori de Dades de Recerca
Contributor Pintado Grima, Carlos; Universitat Autònoma de Barcelona; Universitat Autònoma Barcelona
Publication Year 2024
Funding Reference Agencia Estatal de Investigación PID219-105017RB-I00 ; European Commission GA 952334 (PhasAGE) ; Agència de Gestió d'Ajuts Universitaris i de Recerca 2023 FI_3 00018
Rights CC BY-SA 4.0; info:eu-repo/semantics/closedAccess; http://creativecommons.org/licenses/by-sa/4.0
OpenAccess false
Contact Pintado Grima, Carlos (Universitat Autònoma de Barcelona. Departament de Bioquímica i de Biologia Molecular)
Representation
Resource Type Machine-readable text; Dataset
Format text/tab-separated-values; application/json; text/x-python; text/plain
Size 2377266; 897190; 14686; 7108
Version 1.2
Discipline Life Sciences; Medicine