Genetic dataset for the study Phylogenetic relationships of darkling beetles (Coleoptera: Tenebrionidae) from the Atacama Desert and their classification within world’s Tenebrionidae

DOI

The dataset contains the genetic information of the phylogenetic study of darkling beetles (Coleoptera: Tenebrionidae) from the Atacama Desert. We provide five zip files containing:

1) Supplementary Material S3 which including: - Matrix for ML analysis presented in Fig. 2B (amino acids in PHYLIP format). - Partition schemes of IQ-tree matrix for Fig. 2B (Fig_2B_IQtree_best_scheme). - Partition schemes of matrix for Fig. 2B prior to ModelFinder (AA_partitions). 2) Supplementary Material S4 which including:
- Matrix for ML analysis presented in Fig. 2A (amino acids in PHYLIP format). - Matrix for BI analysis presented in Fig. 2A, including partitions and evolutionary models for each partition (amino acids in NEXUS format). - Partition schemes of IQ-tree matrix for Fig. 2A (Fig_2A_IQtree_best_scheme). - Partition schemes of matrices for Fig. 2A prior to ModelFinder (AA_partitions).

Supplementary Material S5 which including: - Matrix for ML analysis presented in Fig. 3 (amino acids in PHYLIP format). - Matrix for BI analysis presented in Fig. 3, including partitions and evolutionary models for each partition (amino acids in NEXUS format). - Partition schemes of IQ-tree matrix for Fig. 3 (Fig_3_IQtree_best_scheme). - Partition scheme of matrices for Fig. 3 prior to ModelFinder (AA_partitions).

Supplementary Material S7:

  • Matrix including partitions for phylogenetic analyses with 28S, 18S, 16S, and COI genes (alignment in Nexus format) as presented in Fig. 5 and Supplementary Material S9.

Supplementary Material S11: - Matrix including partitions (alignment in Nexus format) for phylogenetic analyses of Opatrini presented in Supplementary Material S11.

Identifier
DOI https://doi.org/10.5880/CRC1211DB.35
Metadata Access http://doidb.wdc-terra.org/oaip/oai?verb=GetRecord&metadataPrefix=oai_datacite&identifier=oai:doidb.wdc-terra.org:6982
Provenance
Creator Ragionieri, Lapo (University of Cologne, Zoological Institute); Bläser, Marcel (University of Cologne, Zoological Institute); Predel, Reinhard (University of Cologne, Zoological Institute); Zúñiga-Reinoso, Alvaro (University of Cologne, Zoological Institute)
Publisher CRC1211 Database (CRC1211DB)
Publication Year 2020
Rights CRC1211DB Data policy agreement; https://www.crc1211db.uni-koeln.de/datapolicy/
OpenAccess true
Representation
Language English
Resource Type Dataset
Version 1
Discipline Geosciences
Spatial Coverage (-71.604W, -29.407S, -65.935E, -16.242N); Chile