Sockeye salmon genome assembly and annotation

The goal of this project was to sequence and assemble a reference genome assembly for sockeye salmon using a combination of sequencing technologies and assembly programs. RNA-seq was performed from multiple tissues to help in the NCBI annotation pipeline. The sample tissues used for genome sequencing and RNA-seq came from female sockeye salmon siblings.

Identifier
Source https://data.blue-cloud.org/search-details?step=~012BAAD1B7E1FA1A4F3E571709A94DA4CC6EED29DC2
Metadata Access https://data.blue-cloud.org/api/collections/BAAD1B7E1FA1A4F3E571709A94DA4CC6EED29DC2
Provenance
Instrument Illumina HiSeq 2500; HiSeq X Ten; Illumina HiSeq 4000; Sequel; ILLUMINA; PACBIO_SMRT
Publisher Blue-Cloud Data Discovery & Access service; ELIXIR-ENA
Publication Year 2024
OpenAccess true
Contact blue-cloud-support(at)maris.nl
Representation
Discipline Marine Science
Temporal Coverage Begin 2017-07-19T00:00:00Z
Temporal Coverage End 2020-04-30T00:00:00Z