Data, Results and tools code for Seed2LP Community paper reproducibility

DOI

These data repository is a tar.gz containing: - Analyses_com: . Data: sbml files retrieved from BiGG database, toy example and community descriptions . Results: all results obtains from the benchmark to get the data visualisation and analyses used on the Paper Seed2LP in Community mode. - notebook: Notebooks to run tests and analyses - scripts: scripts to run tests and analyses - Tool: Seed2LP v2 (Community mode added)

Seed2LP, 2.0.0

Identifier
DOI https://doi.org/10.57745/Y6KDJC
Metadata Access https://entrepot.recherche.data.gouv.fr/oai?verb=GetRecord&metadataPrefix=oai_datacite&identifier=doi:10.57745/Y6KDJC
Provenance
Creator GHASSEMI NEDJAD, Chabname ORCID logo; MENDOZA, Sebastián Nelson ORCID logo; FRIOUX, Clémence ORCID logo; PAULEVE, Loïc ORCID logo
Publisher Recherche Data Gouv
Contributor GHASSEMI NEDJAD, Chabname; FRIOUX, Clémence; Université de Bordeaux; Entrepôt-Catalogue Recherche Data Gouv
Publication Year 2025
Rights info:eu-repo/semantics/openAccess
OpenAccess true
Contact GHASSEMI NEDJAD, Chabname (Pléiade team ; Inria); FRIOUX, Clémence (Pléiade team ; Inria)
Representation
Resource Type Dataset
Format application/gzip
Size 69379299
Version 1.1
Discipline Computer Science; ['Answer Set Programming']; ['Flux Balance Analysis']; ['Solving heuristics']; ['Microbial communities']; ['Metabolic networks']