MassiveFold data generated for CASP16, in collaboration with CAPRI .
8040 predictions were generated for the target = 1005 x 8 sets of parameters.
- a description of the setup can be found in MassiveFold_CASP16_Abstract.pdf
- README.txt describes the contents of the main MassiveFold.tar.gz file
- the main MassiveFold.tar.gz file contains all the predictions, divided into 8 folders named after the conditions. It contains predictions as well as pickle files, sequence alignments, rankings and plots. The README.txt file describes the contents of this tar.gz.
- theonly_pdbs_MassiveFold.tar.gzis the result of thegather_runs.pyscript, without the pickle files. It contains a list of all the pdb files and ranking files with scores.
-gather_runs.pyallows to gather the runs, to use preferentially to the one included in the mainMassiveFold.tar.gzat the time of the prediction phase, because it has been updated
-combined_scores.csvfile contains the CASP assessment for the target (from https://predictioncenter.org/)
-CAPRI_assessment.csvfile contains the CAPRI assessment for the target (from https://www.capri-docking.org/assessment/)
-CAPRI_scoring.pdb.gz` is a multi-pdbs containing all the MassiveFold predictions for the target. It was used for the CAPRI scoring phase.
MassiveFold, 1.2.3
AlphaFold, 2.3.2
ColabFold, 1.5.5