Bacterioplankton communities in a submesoscale cyclonic filament

Water samples were collected in a submesoscale filament observed in the Fram Strait during Polarstern cruise PS107. For assessing bacterial and archaeal community composition 3 L of water were filtered with peristaltic pump through successive membrane filters of 5 µm and 0.22 µm. The extracted genomic DNA was isolated and the hypervariable V4-V5 (515F - 926R) region of the 16S rRNA was amplified and sequenced using Illumina MiSeq platform in a 2 × 300 bp paired-end run.

Identifier
Source https://data.blue-cloud.org/search-details?step=~012861CA3425E839123DEF749BC51E1BE6835482F82
Metadata Access https://data.blue-cloud.org/api/collections/861CA3425E839123DEF749BC51E1BE6835482F82
Provenance
Instrument Illumina MiSeq; ILLUMINA
Publisher Blue-Cloud Data Discovery & Access service; ELIXIR-ENA
Publication Year 2024
OpenAccess true
Contact blue-cloud-support(at)maris.nl
Representation
Discipline Marine Science
Spatial Coverage (2.280W, 78.930S, 2.850E, 79.010N)
Temporal Coverage Begin 2017-07-29T00:00:00Z
Temporal Coverage End 2017-07-31T00:00:00Z