Expression quantitative trait locus (eQTLs) summary statistics from normal colon tissue. Based on TOPMed-imputed SNPs and stratified by colon location

Dataset

DOI

We profiled gene expression of non-neoplastic colon from biopsies of 445 healthy individuals, as described in Díez-Obrero, Virginia et al. “Genetic Effects on Transcriptome Profiles in Colon Epithelium Provide Functional Insights for Genetic Risk Loci.” Cellular and molecular gastroenterology and hepatology vol. 12,1 (2021): 181-197. doi:10.1016/j.jcmgh.2021.02.003. Here we provide eQTL summary statistics for the entire sample size of BarcUVa-Seq data (n=445) as well as its strata by colon anatomic location, i.e. eQTLs from ascending (n=138), transverse (n= 143) and descending (n=164) colon.

Identifier
DOI	https://doi.org/10.34810/data132
Related Identifier	IsCitedBy https://doi.org/10.1016/j.jcmgh.2021.02.003
Metadata Access	https://dataverse.csuc.cat/oai?verb=GetRecord&metadataPrefix=oai_datacite&identifier=doi:10.34810/data132

Provenance
Creator	Diez Obrero, Virginia ; Dampier, Christopher H. ; Moratalla Navarro, Ferran ; Devall, Matthew ; Plummer, Sarah J.; Díez Villanueva, Anna ; Peters, Ulrike; Bien, Stephani ; Huyghe, Jeroen R.; Kundaje, Anshul ; Ibáñez Sanz, Gemma ; Guinó, Elisabet ; Obón Santacana, Mireia ; Carreras Torres, Robert (ORCID: 0000-0002-2925-734X); Casey, Graham; Moreno Aguado, Víctor
Publisher	CORA.Repositori de Dades de Recerca
Contributor	Diez Obrero, Virginia
Publication Year	2021
Rights	CC BY-SA 4.0; info:eu-repo/semantics/openAccess; http://creativecommons.org/licenses/by-sa/4.0
OpenAccess	true
Contact	Diez Obrero, Virginia (Institut Català d'Oncologia (ICO), Institut d'Investigació Biomèdica de Bellvitge (IDIBELL), Centro de Investigación Biomédica en Red de Epidemiología y Salud Pública (CIBERESP), Universitat de Barcelona)

Representation
Resource Type	Other; Dataset
Format	application/x-xz; text/plain
Size	4298890672; 1799618864; 1883249488; 1810130464; 9042
Version	1.0
Discipline	Life Sciences; Medicine