Supporting Data for: Allochrony in Atlantic lumpfish: genomic and otolith shape divergence between spring and autumn spawners

DOI

This data set contains two datasets. Firstly, the Single Nucleotide Polymorphism (SNP) genotypes for the Atlantic lumpfish (Cyclopterus lumpus) used in the population genomics study. Samples are collected from fjords around Norway (Sørøya and Namdal). The genotypes are called using whole genome shotgun sequencing approach. Second data is 4th wavelet data for otoliths. From each contour, a total of 512 Cartesian coordinates on each orthogonal projection of the otolith were extracted using the wavelet representation routines developed in MATLAB® language and implemented in the AFORO v-1.1.2 (‘Anàlisi de FORmes d'Otòlits’) web page (http://aforo.cmima.csic.es/index.jsp). The 4th (medium-small detail) wavelet was selected for further analyses, as it is recommended to capture the optimal level of detail for identification of intra-specific populations or morphotypes.

vcftools, 0.1.16

bcftools, 1.18

AFORO, 1.1.2

Identifier
DOI https://doi.org/10.18710/RRWSIR
Related Identifier IsCitedBy https://doi.org/10.1002/ece3.70946
Metadata Access https://dataverse.no/oai?verb=GetRecord&metadataPrefix=oai_datacite&identifier=doi:10.18710/RRWSIR
Provenance
Creator Horaud, Mathilde (ORCID: 0009-0005-3369-260X); Raventós, Núria ORCID logo; Præbel, Kim ORCID logo; Galià-Camps, Carles ORCID logo; Pegueroles, Cinta ORCID logo; Carreras, Carlos ORCID logo; Pascual, Marta ORCID logo; Tuset, Victor M ORCID logo; Bhat, Shripathi ORCID logo; Lynghammar, Arve (ORCID: 0000-0002-6827-568X)
Publisher DataverseNO
Contributor Mathilde Horaud; Bhat, Shripathi; UiT The Arctic University of Norway; Horaud, Mathilde; Præbel, Kim; Lynghammar, Arve; EvoGenetics Lab, University of Barcelona; Ressearch Group for Genetics, UiT The Arctic University of Norway; Sørøya Rensefisk AS; Namdal Rensefisk AS; Sigma2, Norway
Publication Year 2025
Funding Reference UiT-The Arctic University of Norway PhD Grant ; NORBIS PhD Mobility grant
Rights CC0 1.0; info:eu-repo/semantics/openAccess; http://creativecommons.org/publicdomain/zero/1.0
OpenAccess true
Contact Mathilde Horaud (UiT The Arctic University of Norway); Bhat, Shripathi (UiT The Arctic University of Norway)
Representation
Resource Type SNP genotype data; Dataset
Format text/plain; text/vcard; text/comma-separated-values
Size 5956; 4373099684; 224715
Version 1.0
Discipline Earth and Environmental Science; Environmental Research; Geosciences; Natural Sciences
Spatial Coverage (10.771W, 64.510S, 22.000E, 70.662N)