484 genome skims from the Norwegian arctic vascular flora
Large genomic databases are critical tools for increasing our understanding of species evolution, biodiversity patterns, and response to environmental changes. It is essential that such databases are of high quality, as it will affect all downstream analyses. Here we present a genome skim database of 1969 specimens taken from the herbarium TROM. These represent 1822 Norwegian and polar plant taxa belonging to 558 genera and 111 families. The nomenclature and taxonomic species understanding is coherent, as the revision of herbarium is done by the same persons that lead the Pan Arctic Flora project and the Norwegian flora. Here we provide assembled and annotated nuclear ribosomal DNA (1666 fully assembled) and chloroplast DNA (1106 fully assembled). The data represent >80% cover at species level and 95% cover at genus level for the majority of arctic floristic region.
- 484 genome skims fr...
- Acer pseudoplatanus
- Aconitum maximum
- Agrostis canina
- Agrostis capillaris
- Ajuga pyramidalis
- Alisma plantago aqu...
- Allium oleraceum
- Angelica gmelinii
- Angelica sylvestris
- Arabis hirsuta
- Arctous alpina
- Arnica montana
- Artemisia maritima
- Asarum europaeum
- Asplenium marinum
- Asplenium ruta muraria
- Astrantia major
- Atriplex portulacoides
- Berula erecta
- Betula neoalaskana
- Blitum bonus henricus
- Blitum virgatum
- Blysmopsis rufa
- Botrychium simplex
- Bromus ramosus
- Bromus secalinus
- Calamagrostis arenaria
- Campanula alaskana
- Campanula barbata
- Campanula glomerata
- Campanula trachelium
- Campanula uniflora
- Carex aquatilis sub...
- Carex borealipolaris
- Carex chordorrhiza
- Carex concinna
- Carex digitata
- Carex ericetorum
- Carex flacca
- Carex gmelinii
- Carex holostoma
- Carex krausei
- Carex membranacea
- Carex nigra
- Carex paleacea
- Carex rariflora
- Carex rostrata
- Carex rufina
- Carex saxatilis
- Carex stylosa
- Carex supina var sp...
- Carex vacillans
- Carex viridula
- Castilleja caudata
- Castilleja raupii
- Cerastium arcticum
- Cerastium arvense
- Cerastium diffusum
- Cerastium glomeratum
- Cerastium tomentosum
- Ceratocapnos clavic...
- Ceratophyllum demersum
- Ceratophyllum subme...
- Chaerophyllum aroma...
- Chaerophyllum aureum
- Chaerophyllum presc...
- Chaerophyllum temulum
- Chamaenerion angust...
- Chenopodiastrum hyb...
- Chenopodiastrum murale
- Chenopodium album
- Chenopodium desicca...
- Chenopodium ficifolium
- Chenopodium karoi
- Chenopodium opulifo...
- Chenopodium probstii
- Chenopodium strictum
- Chimaphila umbellata
- Cicuta virosa
- Cirsium acaule
- Cirsium palustre
- Cirsium vulgare
- Cladium mariscus
- Clarkia pulchella
- Claytonia perfoliata
- Claytonia tuberosa
- Clinopodium vulgare
- Cnidium dubium
- Comastoma tenellum
- Conium maculatum
- Consolida regalis
- Coptidium pallasii
- Coriandrum sativum
- Cornus alba
- Cornus sanguinea
- Corrigiola litoralis
- Corydalis nobilis
- Corydalis pumila
- Cota tinctoria
- Cotoneaster acutifo...
- Cotoneaster cinnaba...
- Cotoneaster dammeri
- Cotoneaster dielsianus
- Cotoneaster divaric...
- Cotoneaster horizon...
- Cotoneaster integer...
- Cotoneaster symondsii
- Crassula aquatica
- Crataegus laevigata
- Crepis biennis
- Crepis capillaris
- Cruciata laevipes
- Cytisus scoparius
- Datura stramonium
- Deschampsia cespito...
- Dianthus arenarius ...
- Dianthus barbatus
- Dianthus deltoides
- Dianthus superbus
- Diplotaxis muralis
- Diplotaxis tenuifolia
- Dipsacus fullonum
- Dipsacus strigosus
- Draba aurea
- Draba glabella
- Draba oxycarpa
- Draba verna
- Drabella muralis
- Dracocephalum parvi...
- Dracocephalum ruysc...
- Drosera anglica
- Drosera intermedia
- ELIXIR ENA
- Echinops sphaerocep...
- Elatine orthosperma
- Eleocharis mamillat...
- Elodea canadensis
- Elymus alaskanus
- Elymus caninus
- Elymus caninus x cf...
- Empetrum nigrum
- Epilobium alsinifolium
- Epilobium anagallid...
- Epilobium collinum
- Epilobium davuricum
- Epilobium hirsutum
- Epilobium lactiflorum
- Epilobium montanum
- Epilobium obscurum
- Epilobium parviflorum
- Epilobium roseum
- Erigeron acris var ...
- Erigeron annuus
- Erigeron canadensis
- Erigeron peregrinus
- Eruca vesicaria
- Eupatorium cannabinum
- Euphorbia esula
- Euphorbia exigua
- Euphorbia peplus
- Euphrasia bottnica
- Euphrasia dunensis
- Fagopyrum esculentum
- Fagus sylvatica
- Falcaria vulgaris
- Fallopia dumetorum
- Festuca edlundiae
- Festuca saximontana
- Festuca viviparoidea
- Filipendula vulgaris
- Frangula alnus
- Galeopsis angustifolia
- Galeopsis ladanum
- Galeopsis segetum
- Galinsoga quadrirad...
- Galium elongatum
- Galium mollugo
- Galium normanii
- Galium rotundifolium
- Galium spurium
- Galium spurium subs...
- Galium triflorum
- Galium valdepilosum
- Genista anglica
- Genista tinctoria
- Gentiana algida
- Gentiana prostrata
- Gentianella campest...
- Gentianella uliginosa
- Geranium bohemicum
- Geranium columbinum
- Geranium krylovii
- Geranium lanuginosum
- Geranium molle
- Geranium phaeum
- Geranium pratense
- Geranium pusillum
- Geranium pyrenaicum
- Geranium robertianum
- Geum aleppicum
- Geum ternatum
- Glaucium flavum
- Globularia vulgaris
- Graphephorum cernuum
- Gypsophila elegans
- Harrimanella hypnoides
- Harrimanella stelle...
- Hedlundia subsimilis
- Helianthemum nummul...
- Helianthemum oeland...
- Helianthemum oeland...
- Helichrysum arenarium
- Hepatica nobilis
- Heracleum sphondyli...
- Herniaria glabra
- Hieracium caesium
- Hieracium lachenali...
- Hieracium macranthum
- Hieracium murorum
- Hieracium nigrescens
- Hieracium oistophyllum
- Hippuris tetraphylla
- Hippuris vulgaris
- Hippuris x lanceolata
- Hordeum brachyantherum
- Hottonia palustris
- Hypericum maculatum
- Hypericum perforatum
- Hypericum tetrapterum
- Hypochaeris maculata
- Hypochaeris radicata
- Illecebrum verticil...
- Impatiens parviflora
- Inula ensifolia
- Inula helenium
- Inula salicina
- Isoetes echinospora
- Isoetes lacustris
- Jacobaea aquatica
- Jasione montana
- Juncus alpinoarticu...
- Juncus balticus
- Juncus castaneus su...
- Juncus gerardii sub...
- Juniperus communis ...
- Kickxia elatine
- Knautia arvensis
- Koeleria asiatica
- Koeleria subalpestris
- Koenigia islandica
- Laburnum anagyroides
- Lamium confertum
- Lamprocapnos specta...
- Lathyrus palustris
- Lathyrus sylvestris
- Lepidium coronopus
- Lepidium latifolium
- Leucanthemum maximum
- Ligularia sibirica
- Ligularia stenocephala
- Ligustrum vulgare
- Linaria vulgaris
- Lobelia dortmanna
- Lomatogonium rotatum
- Lotus corniculatus ...
- Lotus maritimus
- Lupinus perennis
- Luronium natans
- Luzula confusa
- Malus fusca
- Meconopsis cambrica
- Melilotus officinalis
- Mentha arvensis
- Micranthes ferruginea
- Micranthes foliolosa
- Micranthes hieracii...
- Micranthes nelsonia...
- Minuartia stricta
- Muscari botryoides
- Myosotis laxa subsp...
- Myosoton aquaticum
- Myricaria germanica
- Oenanthe fluviatilis
- Oxalis stricta
- Oxybasis glauca
- Oxybasis rubra
- Oxyria digyna
- Oxytropis campestris
- Papaver nudicaule
- Papaver orientale
- Papaver radicatum s...
- Papaver radicatum s...
- Papaver radicatum s...
- Papaver radicatum s...
- Papaver rhoeas
- Papaver walpolei
- Pedicularis capitata
- Pedicularis labrado...
- Pedicularis lanata
- Pedicularis langsdo...
- Pedicularis lapponica
- Pentanema britannicum
- Persicaria amphibia
- Petrosedum forsteri...
- Phleum phleoides
- Pilosella hyperborea
- Pilosella officinarum
- Pilosella peleteriana
- Pimpinella major
- Poa leptocoma
- Poa nemoralis
- Polemonium acutiflorum
- Polystichum lonchitis
- Potentilla intermedia
- Potentilla subgorod...
- Primula nutans subs...
- Primula vulgaris
- Prunella vulgaris
- Prunus domestica su...
- Pseudorchis albida ...
- Puccinellia vahliana
- Pyrola chlorantha
- Pyrola rotundifolia
- Ranunculus aconitif...
- Ranunculus arcticus
- Ranunculus fallax
- Ranunculus flammula
- Ranunculus lanuginosus
- Ranunculus lingua
- Ranunculus peltatus
- Ranunculus platanif...
- Ranunculus subborealis
- Ranunculus subborea...
- Ranunculus trichoph...
- Ranunculus wilanderi
- Raphanus sativus
- Rhinanthus alectoro...
- Rhinanthus minor
- Rhinanthus minor su...
- Rhinanthus serotinus
- Rhodiola quadrifida
- Rhododendron lappon...
- Rhododendron toment...
- Ribes spicatum subs...
- Rorippa austriaca
- Rosa glauca
- Rosa mollis
- Rubus arcticus
- Rubus caesius
- Rubus mortensenii
- Rubus odoratus
- Rubus pallidus
- Rubus radula
- Rubus wahlbergii
- Rudbeckia laciniata
- Rumex acetosella su...
- Rumex confertus
- Rumex pseudonatronatus
- Sagina maritima
- Salicornia procumbe...
- Salix arbuscula
- Salix bebbiana
- Salix cinerea
- Salix fragilis
- Salix herbacea
- Salix lasiandra
- Salix myrsinifolia ...
- Salix pentandra
- Salix repens
- Salix repens subsp ...
- Saxifraga adscendens
- Scandosorbus interm...
- Scilla forbesii
- Scrophularia nodosa
- Scrophularia umbrosa
- Scutellaria galeric...
- Scutellaria hastifolia
- Senecio eremophilus
- Sibbaldia procumbens
- Sibbaldia retusa
- Silene tatarica
- Silene uralensis su...
- Sinapis alba
- Sium latifolium
- Solanum rostratum
- Solanum villosum
- Solidago canadensis
- Solidago gigantea
- Sorbus groenlandica
- Sparganium erectum
- Spergula morisonii
- Spiraea betulifolia
- Stachys arvensis
- Stachys byzantina
- Stachys palustris
- Stellaria fennica
- Stellaria longifolia
- Stellaria longipes
- Subularia aquatica
- Symphyotrichum novi...
- Syringa josikaea
- Syringa vulgaris
- Tanacetum parthenium
- Taraxacum ceratophorum
- Taraxacum cornutum
- Taraxacum cymbifolium
- Taraxacum eximium
- Taraxacum maculigerum
- Taraxacum norvegicum
- Taraxacum obliquum
- Taraxacum stictophy...
- Taraxacum xiphoideum
- Teucrium scordium
- Teucrium scorodonia
- Thalictrum minus
- Thalictrum pubescens
- Thalictrum simplex ...
- Thymus praecox subs...
- Thymus talijevii su...
- Tilia cordata
- Torilis japonica
- Tragopogon pratensis
- Triantha occidentalis
- Trientalis europaea
- Trifolium alpestre
- Trifolium arvense
- Trifolium aureum
- Trifolium campestre
- Trifolium dubium
- Trifolium montanum
- Trifolium resupinatum
- Trifolium spadiceum
- Tripleurospermum ma...
- Tripolium pannonicum
- Turritis glabra
- Ulmus glabra
- Urtica gracilis sub...
- Utricularia australis
- Utricularia ochroleuca
- Vaccinium myrtillus
- Vaccinium oxycoccos
- Vaccinium vitis idaea
- Veratrum viride var...
- Veronica alpina
- Veronica anagallis ...
- Veronica beccabunga
- Veronica catenata
- Veronica filiformis
- Veronica montana
- Veronica scutellata
- Veronica spicata
- Veronica verna
- Vicia dumetorum
- Vicia lathyroides
- Vicia orobus
- Vicia pisiformis
- Vicia sepium subsp ...
- Vicia tenuifolia
- Vicia tetrasperma
- Vicia villosa
- Vicia villosa subsp...
- Vincetoxicum hirund...
- Vincetoxicum rossicum
- Viola arvensis
- Viola hirta
- Viola pumila
- Viola reichenbachiana
- Viola rupestris
- Viola selkirkii
- Viola stagnina
- Viola uliginosa
- Viscaria vulgaris
- Viscum album
- Woodsia alpina
- Xanthium strumarium
- Zannichellia palustris
- natural environment
- plant matter
- terrestrial biome
Provenance | |
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Instrument | Illumina HiSeq 2500; Illumina HiSeq 2000; ILLUMINA |
Publisher | Blue-Cloud Data Discovery & Access service; ELIXIR-ENA |
Publication Year | 2024 |
OpenAccess | true |
Contact | blue-cloud-support(at)maris.nl |
Representation | |
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Discipline | Marine Science |
Spatial Coverage | (-165.933W, 53.283S, 65.500E, 79.324N) |
Temporal Coverage Begin | 1865-08-01T00:00:00Z |
Temporal Coverage End | 2017-09-30T00:00:00Z |