Dataset for "High-throughput phenotyping to characterise range use behaviour in broiler chickens"

DOI

A key characteristic of free-range chicken farming is to enable chickens to spend time outdoors. However, each chicken may use the available areas for roaming in variable ways. To check if, and how, broilers use their outdoor range at an individual level, we need to reliably characterise range use behaviour. Traditional methods relying on visual scans require significant time investment and only provide discontinuous information. Passive RFID (Radio Frequency Identification) systems enable tracking individually tagged chickens’ when they go through pop-holes; hence they only provide partial information on the movements of individual chickens. Here, we describe a new method to measure chickens’ range use and test its reliability on three ranges each containing a different breed. We used an active RFID system to localise chickens in their barn, or in one of nine zones of their range, every 30 seconds and assessed range-use behaviour in 600 chickens belonging to three breeds of slow- or medium-growing broilers used for outdoor production (all < 40g daily weight gain). From those real-time locations, we determined five measures to describe daily range use: time spent in the barn, number of outdoor accesses, number of zones visited in a day, gregariousness (an index that increases when birds spend time in zones where other birds are), and numbers of zone changes. Principal Component Analyses (PCAs) were performed on those measures, in each production system, to create two synthetic indicators of chickens’ range use behaviour. Our dataset includes the files needed to calibrate the system (supplementary materials), the data files used in the publication and the associated codes.

Identifier
DOI https://doi.org/10.57745/JUDHTG
Metadata Access https://entrepot.recherche.data.gouv.fr/oai?verb=GetRecord&metadataPrefix=oai_datacite&identifier=doi:10.57745/JUDHTG
Provenance
Creator Collet, Julie ORCID logo; Bonnefous, Claire ORCID logo; Germain, Karine ORCID logo; Ravon, Laure ORCID logo; Calandreau, Ludovic ORCID logo; Guesdon, Vanessa ORCID logo; Collin, Anne ORCID logo; Le Bihan-Duval, Elisabeth ORCID logo; Mignon-Grasteau, Sandrine ORCID logo
Publisher Recherche Data Gouv
Contributor Collet, Julie; INRAE; Entrepôt-Catalogue Recherche Data Gouv
Publication Year 2024
Funding Reference European Commission
Rights etalab 2.0; info:eu-repo/semantics/openAccess; https://spdx.org/licenses/etalab-2.0.html
OpenAccess true
Contact Collet, Julie (INRAE)
Representation
Resource Type Dataset
Format text/comma-separated-values; application/octet-stream; text/tab-separated-values; type/x-r-syntax; text/plain
Size 1374092123; 7706; 1057246321; 7008; 2204116241; 7829; 12835; 69557; 13468; 1910; 44362; 5600
Version 2.0
Discipline Agriculture, Forestry, Horticulture; Life Sciences; Agricultural Sciences; Agriculture, Forestry, Horticulture, Aquaculture; Agriculture, Forestry, Horticulture, Aquaculture and Veterinary Medicine; Biology; Medicine