Phagocytosis assay on the breadcrumb sponge Halichondria panicea using microalgae, bacteria and latex beads: FACS quantification

DOI

Individuals of the breadcrumb sponge Halichondria panicea were collected from the field to perform phagocytic experiments. Collection site: coast of Schilksee (54.424278 N, 10.175794 E; Kiel, Germany) on August 7th 2022 at 8 am. Sponges were collected by carefully detaching them from crevices at 1-3 m depth by snorkeling. Name of the laboratory: H. panicea individuals were transported to the KIMMOCC climate chamber facilities at GEOMAR Helmholtz Centre for Ocean Research Kiel (Germany), where they were kept for two weeks under controlled temperature (room: 10°C; water: 17°C), and with water supplied from the Kiel Fjord. Culture conditions during the experiment: The phagocytic experiments started on Aug 15th 2022, and were performed in the aforementioned facilities of GEOMAR. All the experiments lasted for one week. The experiments consisted on incubating whole sponge individuals in natural seawater for 30 min with green microalgae (Nannochloropsis sp.; live culture purchased from BlueBio Tech (Germany)), live TAMRA-stained bacteria (isolate PP-XX7 ; 16S rRNA gene sequence similarity of 98.6 % with Vibrio sp. NBRC 101805 and 97.0% to Vibrio variabilis R-40492T),) or 1 µm fluorescent latex beads (Fluoresbrite YG microsphere, Cat. 17154-10, Polyscience). Water samples were taken at time intervals through the incubation period to estimate particle uptake (i.e., filtration) by the sponge using flow cytometry. Fluorescence-activated cell sorting (FACS) of sponge cells extracted from H. panciea tissue from the individuals used during the phagocytic experiment was used to quantify phagocytic activity (i.e., the population of sponge cells with internalized particles).FACS quantification of phagocytic sponge cells of H. panicea individuals used during the phagocytic assays. Sponges were incubated for 30 min with three Nannochloropsis sp., TAMRA-stained bacteria (Vibrio sp.), or fluorescent latex beads (1 µm). Differenet algal concentration and chase periods were tested. The sponge (host) cell suspension from each individual was run in the FACS three times (i.e., 3 technical replicates). The average number of events of the replicates is presented. Controls: individuals incubated without particle to correct for natural fluorescence in sponge cells. Bulk sponge cells: total DAPI-stained cell fraction; Non-phagocytic cells: cells without incorporated particle; Phagocytic cells: cells with incorporated particle.

Identifier
DOI https://doi.org/10.1594/PANGAEA.956280
Related Identifier https://doi.org/10.1594/PANGAEA.956281
Metadata Access https://ws.pangaea.de/oai/provider?verb=GetRecord&metadataPrefix=datacite4&identifier=oai:pangaea.de:doi:10.1594/PANGAEA.956280
Provenance
Creator Marulanda-Gomez, Angela Maria ORCID logo; Bayer, Kristina ORCID logo; Pita, Lucía ORCID logo; Hentschel, Ute (ORCID: 0000-0003-0596-790X)
Publisher PANGAEA
Publication Year 2023
Funding Reference German Research Foundation https://doi.org/10.13039/501100001659 Crossref Funder ID 261376515 https://gepris.dfg.de/gepris/projekt/261376515?language=en ; German Research Foundation https://doi.org/10.13039/501100001659 Crossref Funder ID 284381733 https://gepris.dfg.de/gepris/projekt/284381733 Host-microbe cross talk in the early metazoan taxa Porifera and anthozoan Cnidaria (Origin and Function of Metaorganisms/CRC1182-TP B01)
Rights Creative Commons Attribution 4.0 International; https://creativecommons.org/licenses/by/4.0/
OpenAccess true
Representation
Resource Type Dataset
Format text/tab-separated-values
Size 280 data points
Discipline Earth System Research