Replication Data for: Assessment of power spectral density of microvascular hemodynamics in skeletal muscles at very low and low-frequency via near-infrared diffuse optical spectroscopies

DOI

In this work, a state-of-the-art bed-side monitor combining time-domain near infrared spectroscopy and diffuse correlation spectroscopy to measure hemoglobin and blood flow oscillations in the skeletal muscle microvasculature. We focused on very low-frequency and low-frequency oscillations (frequencies below 0.145 Hz), which are associated with myogenic, neurogenic, and endothelial activities. The power spectral density of blood flow and hemoglobin concentration was measured in four muscles (thenar eminence, plantar fascia, sternocleidomastoid, and forearm) of 14 healthy volunteers by Politecnico di Milano. Additionally, we compared the PSDs measured in the thenar eminence of healthy subjects to those measured in a septic patient in the intensive care unit. The data used in this study are read from binary files produced by the platform. These binary files follow a pre-determined format, allowing them to be easily read and processed using various platforms such as MATLAB, Python, and R. The data processing involves then importing the data from these files, followed by appropriate preprocessing steps to ensure appropriate data quality of the displayed data. Preprocessing involves several key steps to prepare the data for analysis. First, movement artifacts are removed. Next, data alignment is performed to synchronize time-series data and to perform power spectral density calculation.

Matlab, 2021b

Identifier
DOI https://doi.org/10.34810/data1867
Related Identifier IsSupplementTo https://doi.org/10.1364/BOE.502618
Metadata Access https://dataverse.csuc.cat/oai?verb=GetRecord&metadataPrefix=oai_datacite&identifier=doi:10.34810/data1867
Provenance
Creator Durduran, Turgut ORCID logo; Karadeniz, Umut; null, Atif yaqub ORCID logo; ZANOLETTI, MARTA ORCID logo; Cortese, Lorenzo ORCID logo
Publisher CORA.Repositori de Dades de Recerca
Contributor Durduran, Turgut
Publication Year 2024
Funding Reference European Union’s Horizon 2020 101016087 ; European Union’s Horizon 2020 675332 ; European Union’s Horizon 2020 101017113 ; European Union’s Horizon 2020 688303 ; European Union’s Horizon 2020 871124 ; Marie Skłodowska-Curie 101062306 ; Fundació CELLEX Barcelona ; Fundació Mir-Puig ; Ajuntament de Barcelona ; Agencia Estatal de Investigación PID2019-106481RB-C31/10.13039/501100011033 ; Agencia Estatal de Investigación CEX2019-000910-S ; MEDLUX ; Generalitat de Catalunya AGAUR-2022-SGR-01457 ; Generalitat de Catalunya RIS3CAT-001-P-001682 CECH ; Fundació Joan Ribas Araquistain ; Fundació La Marató de TV3 ; MUR-PRIN2020 2020477RW5PRIN
Rights CC BY-NC-ND 4.0; info:eu-repo/semantics/openAccess; http://creativecommons.org/licenses/by-nc-nd/4.0
OpenAccess true
Contact Durduran, Turgut (Fundació Institut de Ciències Fotòniques)
Representation
Resource Type Experimental data; Dataset
Format text/tab-separated-values; text/plain
Size 102289; 7599
Version 1.0
Discipline Life Sciences; Medicine; Natural Sciences; Physics
Spatial Coverage Castelldefels, Catalonia, Spain