Sampling information, length measurements, DNA alignments, models and phylogenetics trees for Oithona similis s.l.

DOI

Traditionally, many small-sized copepod species are considered to be widespread, bipolar or cosmopolitan. However, these large-scale distribution patterns need to be re-examined in view of increasing evidence of cryptic and pseudo-cryptic speciation in pelagic copepods. Here, we present a phylogeographic study of Oithona similis s.l. populations from the Arctic Ocean, the Southern Ocean and its northern boundaries, the North Atlantic and the Mediterrranean Sea. O. similis s.l. is considered as one of the most abundant species in temperate to polar oceans and acts as an important link in the trophic network between the microbial loop and higher trophic levels such as fish larvae. Two gene fragments were analysed: the mitochondrial cytochrome oxidase c subunit I (COI), and the nuclear ribosomal 28 S genetic marker. Seven distinct, geographically delimitated, mitochondrial lineages could be identified, with divergences among the lineages ranging from 8 to 24%, thus representing most likely cryptic or pseudocryptic species within O. similis s.l. Four lineages were identified within or close to the borders of the Southern Ocean, one lineage in the Arctic Ocean and two lineages in the temperate Northern hemisphere. Surprisingly the Arctic lineage was more closely related to lineages from the Southern hemisphere than to the other lineages from the Northern hemisphere, suggesting that geographic proximity is a rather poor predictor of how closely related the clades are on a genetic level.

Supplement to: Cornils, Astrid; Wend-Heckmann, Britta; Held, Christoph (2017): Global phylogeography of Oithona similis s.l. (Crustacea, Copepoda, Oithonidae) – A cosmopolitan plankton species or a complex of cryptic lineages? Molecular Phylogenetics and Evolution, 107, 473-485

Identifier
DOI https://doi.org/10.1594/PANGAEA.862554
Related Identifier https://doi.org/10.1016/j.ympev.2016.12.019
Related Identifier https://store.pangaea.de/Publications/Cornils-etal_2017_supplementary_material/Cornils-etal_2017_supplementary_material.zip
Related Identifier https://doi.org/10.1007/s10152-015-0426-7
Metadata Access https://ws.pangaea.de/oai/provider?verb=GetRecord&metadataPrefix=datacite4&identifier=oai:pangaea.de:doi:10.1594/PANGAEA.862554
Provenance
Creator Cornils, Astrid ORCID logo; Wend-Heckmann, Britta; Held, Christoph ORCID logo
Publisher PANGAEA
Publication Year 2017
Funding Reference German Research Foundation https://doi.org/10.13039/501100001659 Crossref Funder ID 5472008 https://gepris.dfg.de/gepris/projekt/5472008 Priority Programme 1158 Antarctic Research with Comparable Investigations in Arctic Sea Ice Areas
Rights Creative Commons Attribution 3.0 Unported; https://creativecommons.org/licenses/by/3.0/
OpenAccess true
Representation
Resource Type Supplementary Dataset; Dataset
Format text/tab-separated-values
Size 3122 data points
Discipline Earth System Research
Spatial Coverage (-164.150W, -71.000S, 56.560E, 88.790N)
Temporal Coverage Begin 2002-11-01T00:00:00Z
Temporal Coverage End 2013-09-23T00:00:00Z