Exploration of decapod crustacean genomes for endogenous WSSV relatives

White spot syndrome virus (WSSV) is a double-stranded DNA virus that is pathogenic to cultured shrimps. Although there have been few reports on free-living WSSV relatives, some shrimp and crabs have been shown to harbor endogenous WSSV-like sequences. To obtain resources for studying comparative genomics of WSSV and its relatives, we explored 15 crustacean genomes for endogenous WSSV-like sequences.

Identifier
Source https://data.blue-cloud.org/search-details?step=~012EE52774ADA1D9D559A1CC7A6E68A28089A962665
Metadata Access https://data.blue-cloud.org/api/collections/EE52774ADA1D9D559A1CC7A6E68A28089A962665
Provenance
Instrument Illumina MiSeq; ILLUMINA
Publisher Blue-Cloud Data Discovery & Access service; ELIXIR-ENA
Contributor Laboratory of Genome Science, Graduate School of Marine Science and Technology, Tokyo University of Marine Science and Technology
Publication Year 2024
OpenAccess true
Contact blue-cloud-support(at)maris.nl
Representation
Discipline Marine Science
Temporal Coverage Begin 2015-01-01T00:00:00Z
Temporal Coverage End 2017-01-01T00:00:00Z