-
Identification of differentially expressed Oncorhynchus mykiss microRNA in pl...
Circulating plasma microRNAs (miRNAs) are well established as biomarkers of several diseases in humans and have recently been used as indicators of environmental exposures in... -
2018 Australia fish microbiome study
Atl salmon study ABSTRACT Successful rearing of fish in hatcheries is critical for conservation, recreational fishing, and commercial fishing through wild stock enhancements,... -
DNA extraction comparison testing 2019-2020
Our DNA extraction protocol is years old, and we want to compare new extraction methods to address outstanding issues. For more details, check out the motivation and... -
Atlantic salmon microbiome Raw sequence reads
The aim of this study was to observe the microbiome on the skin-mucus of farmed Atlantic salmon (Salmo salar), before and after physical stress. The microbial community in the... -
Microbial community of Cassiopea in the Florida Keys Full Length 16S
Full Length 16S sequences were obtained from three medusae sampled in PRJNA1020388. -
Oncorhynchus mykiss gut microbiome 16S rRNA amplicon sequencing
This project analyses the microbiome of the gastrointestinal tract of two rainbow trout lines exposed to different diets and stress conditions -
Knight skin biogeography comparison
Knight_skin_biogeography - Comparison of skin samples from a rat (mammal), cyclostomid (fish), iguana (reptile), bull frog (amphibian) and a bird (pigeon) to determine if the... -
Earth Microbiome Project Multi-omics (EMP500)
The Earth Microbiome Project Multi-omics component (EMP500) involves amplicon and shotgun metagenomic sequencing and metabolomic profiling of over five hundred microbial... -
Song Colorado freshwater fish
Microbiota of slime and gut samples from different species of freshwater fish from the Colorado River. -
Fish microbiota 101: host traits, ecology, and environmental factors influenc...
Fish are the most diverse and widely distributed vertebrates, yet little is known about the microbial ecology of fishes nor the biological and environmental factors that... -
Fish metagenome Targeted loci environmental
16S rRNA sequencing analysis of salmon mucus. The aim of the sequencing was to generate a pseudo-metagenomic database for proteomic studies. -
Patterns of microbiome transition along salinity gradients, and importance fo...
We are interested in whether the host fish microbiome is important for host adaptation to alternate osmotic niches. Toward this goal, we seek to describe the patterns of... -
Topographical mapping the rainbow trout (Oncorhynchus mykiss) microbiome
This study gives a complete map of the bacterial mucosal microbiome of hatchery rainbow trout at five different body sites. We find bacteria with antifungal properties, which... -
Microbial communities influenced by coral mucus
This study investigated the community structure of microbes (bacteria and archaea) in seawater influenced by coral mucus in a fish farming area. The study used a... -
The effect of captivity on the microbiome of spotted eagle rays (Aetobatus na...
Comparison of the microbiome from different body sites of captive and wild spotted eagle rays, and captive cow-nose rays. The samples include swabs collected from the cloaca,... -
Microbial community of Cassiopea in the Florida Keys
Internal and external swabs of wild Cassiopea xamachana and Cassiopea andromeda medusae from the Florida Keys -
Nile tilapia gut microbiota
Gut microbiota of Nile tilapia posterior gut fed with diets supplemented with algae extracts