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The bacteria of Darwin Harbour: spatial and temporal patterns in a tropical m...
Estuaries are renowned for their complex environment and productivity. They are also the focal point of impact between the land and sea and subject to increasing human... -
Zebrafish skin bacterial floras after pathogen challenge
We have developed a percutaneous infection model with zebrafish (Dani rerio) and analyzed skin bacterial floras during the infection. The fish were given the combination of the... -
Initial bacterial colonization of Atlantic salmon (Salmo salar) alevins is st...
The bacterial colonization of a newly hatched fish is known to be important for the larval development and has been found to protect against pathogenic infections. Still, little... -
Taxonomic diversity and succession of estuarine plankton communities
The aim of our project is to describe the bacterial community diversity of two Basque estuaries:, Bilbao estuary, a metropolitan and industrial zone, which is surrounded by this... -
The gut bacterial communities of crucian carp (Carassius auratus) associated ...
Gut microbiota play an important role in host health, and show considerable variation with those environmental factors. However, few studies have yet focused on the interaction... -
Global patterns of 16S rRNA diversity at a depth of millions of sequences per...
The ongoing revolution in high-throughput sequencing continues to democratize the ability of small groups of investigators to map the microbial component of the biosphere. In... -
Knight skin biogeography comparison
Knight_skin_biogeography - Comparison of skin samples from a rat (mammal), cyclostomid (fish), iguana (reptile), bull frog (amphibian) and a bird (pigeon) to determine if the... -
Early salmon fry gut microbiome
Two strains of Atlantic salmon yolk sack fry (aquaculture and wild) were raised under germ-free conditions and, one week after hatching, exposed to water with either r- og... -
Bacterial community in carp intestine
Gut microbiota is increasingly regarded as an integral component of the host, due to important roles in the modulation of the immune system, the proliferation of the intestinal... -
Examination of the skin bacterial floras in flow-through aquaculture
The skin of the fish is exposed to many active microorganisms in water, their epidermis and mucus layer of skin, thus, plays a role as a barrier that protects the host... -
Song Colorado freshwater fish
Microbiota of slime and gut samples from different species of freshwater fish from the Colorado River. -
Metagenome sample taken from adult grass carp (Ctenopharyngodon idellus) inte...
Gut microbiota has become an integral component of the host, and exerts on host biology. Due to its importance, host intestinal bacterial community has received more and more... -
Patterns of microbiome transition along salinity gradients, and importance fo...
We are interested in whether the host fish microbiome is important for host adaptation to alternate osmotic niches. Toward this goal, we seek to describe the patterns of... -
Rio de Janeiro Coastline
Although Brazil is well known for the great biodiversity within its flora and fauna, the microbial diversity has been poorly characterized. The geographic formation of Rio de... -
Bacterial composition in precipitation collected in Japan over one and half y...
We investigate the communities of the precipitation-mediated bacteria based on culture-independent techniques using 30 precipitation samples that captured over one and half... -
Detailed characterization of the microbiomes of lake balls (marimo)
This project will characterize the phylogenetic diversity of eukaryotic and prokaryotic microorganisms of lake balls (marimo) based on metabarcoding and metagenomic data. -
fish_related environments_microbiome
Gut microbiota has become an integral component of the host, and exerts on host biology. Due to its importance, host intestinal bacterial community has received more and more... -
The Sponge Microbiome Project
Marine sponges (phylum Porifera) are a diverse, phylogenetically deep-branching clade known for forming intimate partnerships with complex communities of microorganisms. To... -
Microbiome analysis of rainbow trout
16S rRNA gene amplicon sequences of skin, gut, and gill of rainbow trout and rearing water. 16S rRNA gene of isolates from skin were also analyzed. -
Intestinal Adaptation in Proximal and Distal Segments: Two Epithelial Respons...
Introduction: In short bowel syndrome (SBS), luminal factors influence adaptation in which truncated intestine increases villus lengths and crypt depths to increase nutrient...