56 datasets found

Studies on the structure and function of microbial communities spatial and temporal distribution characteristic in lakes around man-made forests are limited. Here, we used NGS...

Free-living amoebae (FLA) are ubiquitous protist mainly found in water and feeding on bacteria. While most FLA are harmless, Acanthamoeba spp and Naegleria fowleri can cause...

Our study concerns the reliability of techniques for obtaining accurate and quantitative full-length 16S rRNA amplicon sequencing data on bacterial community structure with...

Using samples obtained from an oceanic transect from Jones Sound in the Canadian Arctic Archipelago, we aim to resolve the effect of using two different sequencing primers...

In this study we aim to explore the dispersal of viruses and microbes from the air-sea interface to aerosols and rain.

In order to study the composition of the main phytoplankton communities in the water, we conducted high-throughput sequencing analysis.

Here, we report a dataset capturing the diversity and dynamics of the eukaryotic community at a 16 km stretch of the the Baltic Sea coast and the Warnow river estuary. From...

In this study, we followed the Romaine river in North-Eastern Quebec, Canada, as an example watershed over several years (2015-2018) and seasons (spring, summer, autumn). Our...

The objective of this project was to assess winter under-ice microbiome of the Great Whale River (Nunavik, Canada) and its discharge plume into Hudson Bay. Size-fractionated...

Comparison of different sample types using different primers and platforms

The objective of this project was to assess winter under-ice microbiome functionnal potential of the Great Whale River (Nunavik, Canada) and its discharge plume into Hudson Bay.

Archaea and bacteria are unique microbial communities of prokaryotic taxa that are important in the functioning of lakes Olbolosat a freshwater ecosystem and Oloiden a...

Metagenomics is widely applied to study marine microbial communities. High quality DNA samples are critical for metagenomic projects' success. In this work, we systematically...

We investigated the effect of environmental filtering depicted by salinity on the bacterial community in the water, sediment and in a host-protected system within the digestive...

Water samples were collected at sites across the Louisiana coastline. The goal was to see seasonal and temporal differences of microbial communities across the coastal northern...

A systematic analysis of the most commonly amplified 18S rRNA hypervariable regions and the effect that PCR/sequencing bias has on community representation. The V4 and V8-V9...

Understanding how coral holobionts, including microbial and algal symbionts, contribute to stress resilience is critical for safeguarding reef ecosystems under accelerating...

12 16S samples of the Western Pacific Ocean, 105 16S samples of Tibetan Plateau glacier and river

Biological aerosols serve as efficient ice-nucleating particles (INPs), driving the liquid-to-ice transition in clouds and thereby shaping cloud thickness, lifetime, albedo, and...

In this study we show that the hipervariable regions V5-V7 of the 16S rRNA gene is the most appropriated to study the diversity and structure of picocyanobacterial communities...