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Bioinspired cell silicification of the model diatom Phaeodactylum tricornutum...
Biosilicification enhances the mechanical strength and chemical stability of organisms. Diatoms are the natural model for studying cell silicification, with the model diatom... -
Phytoplankton counts in shrimp L. vannamei culture with G. birdiae in integra...
This dataset has no description
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Experiment of grazing effects on Phaeodactylum tricornutum strains: cellular ...
This dataset has no description
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Experiment of grazing effects on Phaeodactylum tricornutum strains: cell abun...
This dataset has no description
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Seawater carbonate chemistry and oxidative stress response, carbon metabolism...
We conducted a full-factorial lab experiment to study the individual and combined effects of temperature (18°C and 21°C), pCO2 (400 and 1000 ppm), and dissolved N:P ratio (16... -
Temperature effects on the physiology of photosynthesis and respiration in Ph...
Phaeodactylum tricornutum strain CCAP 1052/1A was cultivated at 6°C and 15°C under controlled conditions (32 salinity, F/2 medium, 400 µatm pCO2, 100 µmol photons m-2 s-2 light... -
Nitrate limitation and ocean acidification interact with UV-B to reduce photo...
It has been proposed that ocean acidification (OA) will interact with other environmental factors to influence the overall impact of global change on biological systems.... -
Abundance of phytoplankton in the Cilician Basin during the Bilim 2 cruise in...
The dataset is composed of 57 samples from 15 stations. The phytoplankton samples were collected by 5l Niskin bottles attached to the CTD system. The sampling depths were... -
Chemoproteomic profiling of serine hydrolases reveals the dynamic role of lip...
Transcriptomics of Phaeodactylum tricornutum (strain Pt4) analysis provides a complementary insight into the gene expression level of serine hydrolases. -
Light-modulated responses of growth and photosynthetic performance to ocean a...
Ocean acidification (OA) due to atmospheric CO2 rise is expected to influence marine primary productivity. In order to investigate the interactive effects of OA and light... -
Phaeodactylum tricornutum transcriptional in response to additions of Glufosi...
The goal of this study was to investigate transcriptional dynamics in response to additions of 1) Glufosinate-ammonium, 2) L-Methionine sulfoximine, 3) Rapamycin -
PacBio amplicon re-sequencing of 62 P. tricornutum genomic loci
Re-sequencing of 62 endogenous P. tricornutum loci selected in a genome-wide analysis of haplotype diversity. The goal was to determine the number of haplotypes per locus and... -
Population genomics of Phaeodactylum tricornutum
Using the whole genome sequencing data, we analyzed the population structure of ten Phaeodactylum tricornutum strains/ecotypes. -
A comparative genomic perspective on diatom diversity and evidence of transpo...
Diatoms, pivotal in aquatic ecosystems, evolved from secondary symbiosis. Transposon elements (TEs) play key roles in genome evolution and species diversity. Long-read... -
Diatoms like Phaeodactylum tricornutum are emerging as bio-factories for terp...
Diatoms have recently emerged as promising platforms for producing high-value terpenoids, yet the regulatory mechanisms governing their terpenoid metabolism remain poorly... -
Next generation sequencing of Phaeodactylum tricornutum grown with and withou...
We have done next generation sequencing of optically thin, exponentialy growing Phaeodactylum tricornutum cultures grown with and without nitrogen source to improve our... -
Evolutionary and functional analysis of DNA methyltransferases in micro-eukar...
DNA methylation has been associated with transcriptional repression of transposable elements. Here we describe the first DNA methylation deficient cell line of a diatom by... -
Diatom morphology study
The model diatom Phaoedactylum tricornutum changes its morphotype during surface colonization, which makes it a good candidate to understand and control diatom biofilm at... -
Phaeodactylum tricornutum differentially expresses transporters during terpen...
Diatoms play a key role in global phytoplankton productivity and produce a diverse range of valuable terpenoids through two separate pathways: the mevalonate pathway in the... -
Phaeodactylum tricornutum wild type and ptELO5a mutants Raw sequence reads
Phaeodactylum tricornutum wild type and ptELO5a mutants at exponential and stationary phases of incubation at normal condition and samples collected after 1 day and 3 days of...
