25 datasets found

High molecular weight DNA extraction of different Penicillium spp. followed by long read sequencing and de novo assembling.

The increased usage of long read sequencing has not been matched with publicly available databases suited for error-prone long reads when applied to metabarcodes. We address...

Genome sequence database of fungi found in foods for strain characterization and identification

LoopSeq sequencing data derived from amplicons of the full-length 16S rRNA in bacteria, the 18S-ITS region in fungi, and random amplified segments of baterial genomes.

Gaining new knowledge through fungal monoculture responses to lignocellulose is a widely used approach that can lead to better cocktails for lignocellulose saccharification (the...

To interrogate single-base resolution 6mA sites in the genome-wide, we develop DA-6mA-seq (DpnI-Assisted N6-methylAdenine sequencing), an optimized sequencing method taking...

Fungi isolated from various surfaces of the International Space Station during the Microbial Tracking I study

Small RNA sequencing was performed to investigate Dicer-dependent biogenesis of small RNAs and to provide evidence for microRNA-like small RNAs in P. chrysogenum.

Illumina sequencing data of Penicillium Chrysogenum 28R-6-F01 for genome survey

Small RNA sequencing was performed to investigate Dicer-dependent biogenesis of small RNAs and to provide evidence for microRNA-like small RNAs in P. chrysogenum.

Comparative RNA-seq analyses of industrial beta-lactam producers with respective wild-type and velvet deletion strains.

This study aims to describe the transcriptomic responses of Penicillium chrysogenum after exposure to either enantiomer of 1-octen-3-ol.

Blue mold is an economically significant postharvest disease of pome fruit that is primarily caused by Penicillium expansum. To manage this disease and sustain product quality,...

identification of binding sites of the mating type protein MAT1-1-1

The complete genome sequence of IB 08/921, a MAT1-2 wild type Penicillium chrysogenum strain that was isolated from an air sample collected in Innsbruck, Austria, was carried...

Strain selection and strain improvement are the first, and arguably most important, steps in the industrial production of biological compounds by microorganisms. While...

Acetaminophen (APAP), an active component of many analgesic and antipyretic drugs, is one of the most concerning trace contaminants in the environment, being considered as an...

Pacbio sequencing data of Penicillium Chrysogenum 28R-6-F01

Ascosporeisolate AS25-3 was isolated from a cleistothecium produced in mating of Penicillium chrysogenum strains P2niaD18 and ascospore isolate AS25, a crossing product of Q176...

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