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Selection of chitin degrading bacterial communities starting from natural mar...
This project aimed to characterize bacterial communities from three natural marine environments: a marine sponge (Hymeniacidon perlevis) and its surrounding sediment and... -
Diversity patterns of uncultured Haptophytes unravelled by pyrosequencing in ...
Haptophytes are a key phylum of marine protists, including ~300 described morphospecies and 80 morphogenera. We used 454-pyrosequencing on large subunit ribosomal DNA (LSU rDNA)... -
A Comparison of Biomonitoring Methodologies for Surf Zone Fish Communities
Surf zones are highly dynamic marine ecosystems that are subject to increasing anthropogenic and climatic pressures, posing multiple challenges for biomonitoring. Traditional... -
Metagenomic sequencing of marine hydrocarbon degrading microcosms
Whole community metagenomic sequencing of microbial hydrocarbon degradation in seawater with photo-oxidized and untreated oil amendments. -
Accuracy of protist diversity assessments: morphology compared to cloning and...
Deep-sequencing technologies are becoming nearly routine to describe microbial community composition in environmental samples. 18S rDNA pyrosequencing has revealed a vast... -
Baltic Proper time series in an offshore station (LMO) and coastal station (K...
We monitored the picocyanobacterial community composition over three consecutive years (2018-2020) at a coastal (K-station) and offshore stations (LMO). -
16S amplicon sequencing of epilithic bacterial communities
Epilithic bacterial assemblages on subtidal rocky reefs:</p><p>Variation among alternative habitats at ambient and enhanced nutrient levels -
Ocean Sampling Day (OSD) 2014: AUTHORITY-RAW amplicon and metagenome sequenci...
Sequencing of amplicon and metagenome samples from the main OSD event, representing joint effort of marine sampling stations around the world. The OSD campaign aims to analyze... -
Dynamena pumila reference transcriptome
Dynamena pumila reference transcriptome -
DECODING THE THREE-WAY ECOLOGICAL INTERACTION BETWEEN COASTAL EPIPELAGIC COPE...
We seasonally collected zooplankton and surface seawater samples in the coastal waters of the Israeli Mediterranean Sea. We identified by morphological characters and DNA... -
Selection of chitin degrading bacterial communities starting from natural mar...
This project aimed to characterize bacterial communities from three natural marine environments sampled in Southern Portugal: a marine sponge (Sarcotragus spinosulus), a coral... -
Seawater metagenome Targeted loci environmental
Seasonal phytoplankton (16S, 18S) and prokaryotic community structure under fluctuating and constant temperatures at the San Pedro Ocean Time-series. -
Microbial communities associated to the invasive kelp Undaria pinnatifida
Undaria pinnatifida is a brown algae native to Asia that has settled in various regions worldwide, periodically contributing with large quantities of C and nutrients during its... -
Bacterial composition of Gullmar Fjord
This study characterizes the 16S V3-V4 rRNA gene composition within the water column of the Gullmar Fjord. Samples were collected in two transects that traversed the length of... -
Brachyistius frenatus isolate:BFR_SWC_R1_liver_20210118 Genome sequencing and...
Genome assembly of the kelp surfperch, Brachyistius frenatus using Nanopore (MinION) and Illumina (NovaSeq) sequencing. Specimen collected from Stillwater Cove, Carmel, CA, USA. -
Amplicon sequencing of marine samples from Sydney Harbour including 16S and 1...
Samples taken from two locations in Sydney, Iron Cove and Sydney Institute of Marine Sciences, at 13 different time points covering two different seasons as well as a rainfall... -
Association between Legionella species and humic substances during early summ...
We performed a study of the species diversity of Legionella in the northern Baltic Sea (Gulf of Bothnia) during early summer to map their occurrence and to identify possible... -
Mycoplankton metacommunities of coastal habitats in a subarctic zone (norther...
Fungi are one of the most understudied microbial groups in aquatic environments. Our knowledge on their assembly, distributions and ecological roles in marine ecosystems are... -
Pathogen protozoan interactions in the Baltic sea
Little is known about the origin of predation resistant bacteria (PRB) and how they interact with their environment and community members. We performed a study in the coastal... -
Microbiomes of Northeast Pacific killer whales
Killer whales of the Northeastern Pacific consist of multiple populations & ecotypes, but obtaining samples from these free-ranging animals remains opportunistic....