30 datasets found

Symbiodiniaceae ITS2 amplicon sequencing of seawater and coral samples

Coastal zooplankton samples were collected from coral reef area of Okinawa islands. Species richness and Shannon diversity indexes were estimated from those samples using...

Marine sponges are essential for the survival and productivity of coral reefs, and host a distinct community of microorganisms. These microbes can shape sponge phenotype by...

Raw sequencing data for nextRAD libraries from Agaricia undata

Growth anomaly (GA) is a coral disease that has significant negative impacts on coral biology, yet our understanding of its etiology and pathology is lacking. In this study we...

Ocean acidification is a result of increased anthropogenic CO2 input into the atmosphere and carries with it consequences for all ocean life. Low pH can cause a shift in...

Two generations of A. polyacanthus have been exposed to to simulated ocean warming with natural diel thermal fluctuations at different ontogenetic stages to disentangle the...

To recovery bacterial genomes from coral metagenomes and understand their roles in holobionts.

Metagenome (16S rRNA) of microbial organisms associated with the scleractinian coral Acropora aspera (injured and control)

To explore coral Symbiodinium community structures and variations.

Describing living community compositions is essential to answer basic ecological questions however, it is a challenging task on the morphological and molecular level....

Data presented here are the result of an undergraduate Marine Microbial Genomics (MMG) laboratory course (BIOL567L) at San Diego State University (SDSU). The goal of this...

Characterization of coral-associated microbial aggregates (CAMAs)

Reef-building corals are highly sensitive to rising ocean temperatures, and substantial adaptation will be required to persist in changing ocean conditions. In this study, we...

We provide comprehensive insights into the putative functional role of the tissue microbiome on key metabolic processes.

Generation of viromes from coral tissue samples using an optimized method

In this study, we examined whether another morph of Negombata in the Red Sea, Negombata rotundata sp.nov. is a novel species by using an integrative approach which included...

Comparison of microbiome of the marine sponge Aplysilla rosea with and without addition of Vibrio natriegens after 24 and 48 hours in controlled aquarium system

Algal cultures are often maintained in non-axenic conditions, i.e., with associated bacteria, and many studies indicate that these communities are both complex and have...

Microbial genomes and metagenomes isolated during the 2013 Southern Line Islands Research Expedition. The samples are from coral reefs in the central pacific. These genomes and...