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Volume and surface methods for microparticle traction force microscopy: a com...
It is an essential element of mechanobiology to measure the forces of biological cells. In microparticle traction force microscopy, they are inferred from the deformation of... -
Cell Bulging and Extrusion in a Three-Dimensional Bubbly Vertex Model for Cur...
Cell extrusion is an essential mechanism for controlling cell density in epithelial tissues. Another essential element of epithelia is curvature, which is required to achieve... -
Structure-Based Model (SBM) simulations for the folding process of the FoxP1 ...
Structure-Based Model (SBM) simulations for the folding process of the FoxP1 protein using the SBMOpenMM library. Fifteen equilibrium replicas of 10 μs each were carried out at... -
Replication Data for: Fibrillar adhesion dynamics govern the timescales of n...
This data set includes all the source data corresponding to the each figure published in the paper entitled “Fibrillar adhesion dynamics govern the timescales of nuclear... -
Replication Data for: Fibrillar adhesion dynamics govern the timescales of n...
This data set includes all the source data corresponding to the each figure published in the paper entitled “Fibrillar adhesion dynamics govern the timescales of nuclear... -
Replication Data for: Guidance of cellular nematic elastomers into shape-prog...
This dataset contains all raw data supporting the manuscript, including microscopy images and main raw data extracted from these images. Microscopy data are provided in their... -
Large-scale simulations data near the supercooled liquid-liquid critical poin...
The data in this dataset represent simulations of supercooled water at the liquid-liquid critical point using the transferable molecular CVF model for water. The model is... -
Replication Data for: Nucleocytoplasmic transport senses mechanics independen...
Cells sense and respond to mechanical forces through mechanotransduction, which regulates processes in health and disease. In single adhesive cells, mechanotransduction involves... -
Replication Data for: 'A transferable molecular model for accurate thermodyna...
This repository contains 1) Source code to run CVF water simulations 2) Scripts to produce input files and run the simulations 3) The necessary data to reproduce the figures... -
Replication Data for: Guidance of cellular nematic elastomers into shape-prog...
This dataset contains all raw data supporting the manuscript, including microscopy images and main raw data extracted from these images. Microscopy data are provided in their... -
Replication Data for: Emergence of Chemotactic Strategies with Multi-Agent Re...
Scripts used in the experiments and analysis presented in the paper. -
demoa-base: a biophysics simulator for muscle-driven motion
For more information, such as installation, requirements and user guide, please see the demoa manual. The development of this package was supported by “Deutsche... -
Replication Data for: Acoustic wave-induced stroboscopic optical mechanotypin...
This dataset contains pre-treated data and a small analysis API to reproduce part of the Figure from the article: "Acoustic wave-induced stroboscopic optical mechanotyping of... -
Chirality of malaria parasites determines their motion patterns [data]
This is a data repository for the publication "Chirality of malaria parasites determines their motion patterns". It includes example data for the different experimental setups,... -
Changes in ESCRT-III filament geometry drive membrane remodelling and fission...
These are the data sets required to generate the figures in our paper 'Changes in ESCRT-III filament geometry drive membrane remodelling and fission in... -
Cell-scale biophysical determinants of cell competition in epithelia
This dataset contains: -data used to compare computer simulations of cell competition to experiments -code, raw data, and processed data of the simulations detailled in the... -
Atomic force microscopy data on amyloid disaggregation by Hsp70 disaggregase
Data for manuscript preprint on bioRxiv (https://doi.org/10.1101/2021.08.29.458036) and accepted for publication at EMBO Journal (https://doi.org/10.15252/embj.202111041). -
Spindle reorientation in response to mechanical stress is an emergent propert...
The zipped folder contains the data related to each of the figures and supplementary figures of the manuscript. -
Data and scripts for paper "Modelling Membrane Reshaping by Staged Polymeriza...
Data and scripts for paper "Modelling Membrane Reshaping by Staged Polymerization of ESCRT-III Filaments". Including data points for figures in main and SI, and LAMMPS input file. -
Scripts and data for paper "The patterned assembly and stepwise Vps4-mediated...
final data points, matplotlib scripts, and lammps input scripts used to generate the computational work including Fig.5, Fig.S5, Fig.S7 in this work. Final data points and plot...
