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fish_related environments_microbiome
Gut microbiota has become an integral component of the host, and exerts on host biology. Due to its importance, host intestinal bacterial community has received more and more... -
The Sponge Microbiome Project
Marine sponges (phylum Porifera) are a diverse, phylogenetically deep-branching clade known for forming intimate partnerships with complex communities of microorganisms. To... -
Microbiome of Oncorhynchus mykiss
Multiple microbiomes of rainbow trout after chronical exposure of glyphosate -
16S rRNA Metagenomic Sequencing of Surface Water Samples from Caloosahatchee ...
Initial survey of prokaryotic diversity in Caloosahatchee River and Estuary from highly monitored Caloosahatchee River and Estuary sites. Surface water samples were collected by... -
Host-Specificity and Dynamics in Bacterial Communities Associated with Bloom-...
Many freshwater phytoplankton species have the potential to form transient nuisance blooms that affect water quality and other aquatic biota. Heterotrophic bacteria can... -
High Resolution Analyses of Wildlife and Environmental Escherichia
WGS and metabarcoding analyses of wildlife and environmental Escherichia to investigate the impact of wildlife in water quality assessments -
Subarctic rivers and brackish plume, 16S and 18S amplicons sequencing
The objective of this project was to evaluate the microbial community structure, diversity and environmental drivers of the Great Whale River, including some of its tributaries... -
A whole-watershed microbiome reveals a cross-biome role in symbiont sources a...
In this study we map microbial distributions within a small, natural watershed in order to examine source-sink dynamics of symbiotic microbes at the landscape scale, among... -
freshwater Raw sequence reads
The bacterial community in Weihe River basin of northwest China -
Changes in rearing water microbiomes in RAS induced by membrane filtration al...
In this study we investigated the effect of membrane filtration in RAS on water microbiomes and the hindgut microbiomes of the reared Atlantic salmon parr. The experiment is... -
Northern Pike Gut Microbiota Raw sequence reads
16S rRNA sequenced reads from the gut microbiota of Northern Pike collected in different spawning marshes. The work sought to discern differences in gut microbiota in juvenile... -
Hydrocarbon Metagenomics Project
Metagenomics for Greener Production and Extraction of Hydrocarbon Energy: Creating Opportunities for Enhanced Recovery with Reduced Environmental Impact -
Taxonomy and functional diversity of bacterial communities in lake under the ...
Studies on the structure and function of microbial communities spatial and temporal distribution characteristic in lakes around man-made forests are limited. Here, we used NGS... -
18S metagenome of sponges in Lake Baikal
The eukaryotic diversity from healthy and diseased Lubomirskia baicalensis and Baikalospongia bacillifera sponges was studied by 454 sequencing approach. The drastic mortality... -
aquatic metagenome Metagenome
Microbial community diversity -
Microbial marker for seawater intrusion in a costal Mediterranean shallow lak...
Climate change-induced pressures and increased water demand impose an</p><p>additional threat to the sustainability of coastal freshwater... -
Evaluation of PCR conditions for characterizing bacterial community with full...
Our study concerns the reliability of techniques for obtaining accurate and quantitative full-length 16S rRNA amplicon sequencing data on bacterial community structure with... -
Microbiome analysis of rainbow trout
16S rRNA gene amplicon sequences of skin, gut, and gill of rainbow trout and rearing water. 16S rRNA gene of isolates from skin were also analyzed. -
Perceived differences in microbial community composition resolved by Illumina...
Using samples obtained from an oceanic transect from Jones Sound in the Canadian Arctic Archipelago, we aim to resolve the effect of using two different sequencing primers... -
Microbial community composition in the GBR
Investigating the shift in microbial community composition associated with minberal particles in different environment (soil, freshwater and marine environment) of the GBR.