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Leopard Coral Grouper
metagenome data for gut microbiota, seawater samples (costal seawater, inlet seawater, rearing tank seawater, outlet seawater) -
Microbial diversity in arctic freshwaters is structured by inoculation of mic...
A 12-year sample archive of DNA from Alaskan arctic tundra ecosystems are available to the Earth Microbiome Project for comparison of microbial diversity across a range of... -
Japanese eel microbiome
In rearing systems for the Japanese eel, the influence of bacterial communities on eel larval survival remains unknown. We compared the bacterial communities associated with... -
Baleen whales host a unique gut microbiome with similarities to both carnivor...
Mammals host gut microbiomes of immense physiological consequence, but the determinants of diversity in these communities remain poorly understood. Diet appears to be the... -
WGS of allopatric P. pungitius and P. sinensis
Whole genome re-sequencing of allopatric Pungitius sinensis and P. pungitius. Wild-caught Pungitius sinensis (Musashi Tomiyo) and lab-raised Pungitius pungitius from Denmark... -
metaT
Data deposited here are raw sequences produced for the following paper: Wutkowska M., Vader A., Logares R., Pelletier E., Gabrielsen T.M., 2023, Linking extreme seasonality and... -
Tijuana River pollution at Imperial Beach 2019
Rain events increase Tijuana river flow to levels that the international water treatment plant in the Mexico-US border can not process. Therefore, rain runoff and sewage... -
Triplicate PCR reactions for 16S rRNA gene amplicon sequencing are unnecessary
Conventional wisdom holds that PCR amplification for sequencing should employ pooled replicate reactions to reduce bias due to jackpot effects and chimera formation. However,... -
gradient bacteria
coastal gradient bacteria -
Latitudinal surveys of algal-associated microorganisms
Over the last decade, disease has emerged from being a long overlooked factor in natural communities to become an increasing focus for ecological research in terrestrial and... -
Viral and Protistan Associates with New Zealand Asteroidea
Investigation of viruses and protists associated with asteroidea in the Auckland region, New Zealand. The goal of this work was to understand their diversity, and provide... -
Microbiome profiling and prediction of antibiotic resistance genes in untreat...
This dataset has no description
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Developing techniques of DNA/RNA analyses for studying ecological communities...
Monitoring natural ecological communities is often time-, labour-, and money-consuming work. DNAs that are derived from organisms and remain in natural environments... -
Microbial Ecology of Wasting Disease in Pisaster ochraceus
Sea star wasting is a condition affecting >20 asteroid taxa, and since 2013 has caused mass mortality in the northeast Pacific Ocean. We studied the progression of wasting... -
DNA metabarcoding for biodiversity monitoring in Antarctic nearshore environm...
(1) Are there differences between sediment and water environmental DNA (eDNA) samples in terms of (a) number of reads assigned to metazoans, non-metazoans, and unclassified, (b)... -
Arctic microbiome along Svalbard Cross Shelf transects (2017 Campaign)
Microbiome analysis of seawater samples collected at stations along Svalbard Cross Shelf transects (Kongsfjorden and Rijpfjorden), at different depths, based on V4-V5 16S rRNA... -
Microbiome of the gastrointestinal tract of the rabbitfish Siganus fuscescens
Investigation of the microbiome in the gastrointestinal tract of the rabbitfish Siganus fuscescens including samples from the gut content and gut wall of the mid and hind gut... -
Fungal isolate, Penicillium, derived from the symbiotic anemone, Exaiptasia d...
Penicillium, a fungal associate of the anemone, Exaiptasia diaphana, was isolated for genome sequencing and assessment of secondary metabolite... -
Vertical dynamics and the hidden diversity of Alveolata and Rhizaria in the w...
The study of the vertical distribution of plankton communities obtained with 18S ribosomal DNA along with the marine environment (from surface to deep layers) in the subtropical... -
Microbial communities influenced by coral mucus
This study investigated the community structure of microbes (bacteria and archaea) in seawater influenced by coral mucus in a fish farming area. The study used a...