155 datasets found

Estuary suspended particulate matters are an important niche to mediate the nitrogen transformation process. In order to fully understand the nitrogen transformation process...

This project focuses on the Amazon River-to-tropical Atlantic Ocean continuum because of both its immense scale and its apparent sensitivity to climate variability and...

Using treated wastewater (TWW) for irrigation could alleviate potable water (PW) stress and provide food security in arid environments. However, TWW irrigation could present a...

A field study of microbes across an SGD gradient

raw 16S rRNA gene sequences data from eDNA samples of surface sediment in different trawled and non-trawled locations of the Baltic Sea</p><p>For 18S data from the...

Multi-marker eDNA metabarcoding assessment in the Apulia Peninsula (Italy) comparing water and sediment sample type. First lane of the NovaSeq sequencing run.

Bacterial (and some archaeal) V3V4 sequences collected at the Linnaeus Microbial Observatory (LMO) in the Baltic Sea 2013 using three different filter setups: directly on 0.2...

Sediment DNA

Microbial communities play integral roles in biogeochemical cycles through coupled metabolic processes that give rise to higher order ecosystem functions and services. Their...

The goal was to assess the effects of a contaminant mixture on bacteria and meiofauna community structure using 16S rRNA and 18S rRNA marker from marine sediments. The exposure...

The purpose of the present study was to evaluate the effect of stocking density of L. vannamei on digestive enzymes,Nonspecific immune-related enzymes and microbial community...

16S rRNA gene data collected from surface water in a temperature affected bay, and a nearby unaffected bay

The primary goal of this project is to study how bacterial communities of different aquatic origin differ in the processing of terrigenous dissolved organic matter. Bacterial...

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The Rajang River is the main drainage system for central Sarawak in Malaysian Borneo which passes through peat domes whereby peat-rich material is being fed into the system and...

Bacterial (and some archaeal) V3V4 sequences collected at the Linnaeus Microbial Observatory (LMO) in the Baltic Sea 2015-16 using three different filter setups: directly on 0.2...

The purpose of this work was to test the efficacy of Fluidigm IFC chips in conjunction with an Illimina MiSeq nano reaction to optimize primer decision using a mock community of...

Bacterial (and some archaeal) V3V4 sequences collected at the Linnaeus Microbial Observatory (LMO) in the Baltic Sea 2016-17 using three different filter setups: directly on 0.2...

Study of active microbial communities associated with larvae of Litopenaeus stylirostris and with rearing water during larval rearing in shrimp hatcheries

At five coastal sites in Southern California we used metabarcoding to profile Vibrio associated prokaryotic and eukaryotic communities. We used 16S and 18S rRNA gene sequences...