583 datasets found

This study investigated the response of bacterioplankton communities to the polysaccharides chitin, alginate, and agarose using seawater microcosms at four distant locations in...

Arctic sea-ice and sub-ice seawater crude oil microcosms

The seawater metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA441393. This project includes samples from...

The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJNA214436, and was assembled with SPAdes v3.14.1, metaSPAdes...

To examine the diversity of the microbial plankton in the northern and southern extremes of the Red Sea.

The marine metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA365243. This project includes samples from...

This study compared the presence/absence and relative abundance of marine fishes and mammals in different nearshore habitats using environmental DNA (eDNA) versus visual surveys...

Vibrionaceae rRNA sequences from seawater, sediment, and oyster hatchery samples. Vibrio-specific 16S rRNA genes were amplified using VF169 and 680R primers (Yong et al. 2006,...

Diatom and other Stramenopile community composition from targeted amplicon sequencing of V4 region of 18S from incubated seawater collected in upwelled waters off the coast of...

The goal of this project is to monitor the dynamics of environmental DNA (e.g., fish DNA found in a water sample) quantitatively. By adding internal standard DNA, a standard...

Protists form a major part of the Arctic ecosystem and are of great importance for biodiversity and productivity of the Central Arctic Ocean (CAO). The sea ice is considered as...

The marine metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA330084. This project includes samples from...

WE INVESTIGATED THE DIVERSITY OF MICROBIAL EUKARYOTES IN THE SURFACE WATERS OF THE ARAFURA SEA, TORRES STRAIT AND CORAL SEA, USING FLOW CYTOMETRY AND HIGH-THROUGHPUT SEQUENCING...

Climate change can cause effect on marine ecosystem. As a result, higher temperature and enrichment of carbon dioxide of seawater would be expected in the future scenario. In...

Illumina bacteria and archaea 16S rRNA genes

Bacterial (and some archaeal) V3V4 sequences collected at the Linnaeus Microbial Observatory (LMO) in the Baltic Sea 2012-13 collected directly on a 3 um filter.

A mesocosm-scale experiment to investigate the electrobioremediation of crude oil-contaminated marine sediments.

Iron fertilization experiments in high-nutrient, low-chlorophyll areas are known to induce phytoplankton blooms. However, little is known about the response of the microbial...

The main objectives of the present study were the in-depth characterization of bacteria and archaea diversity and community distribution in the coastal sediments along a...

The Boom Clay layer is presently investigated as a potential host rock for geodisposal of nuclear waste in Belgium. The HADES underground research facility (EIG Euridice c/o...