Quantitative monitoring of environmental DNA using high-throughput sequencing

The goal of this project is to monitor the dynamics of environmental DNA (e.g., fish DNA found in a water sample) quantitatively. By adding internal standard DNA, a standard curve (i.e., the relationship between the number of DNA copy and sequence read) will be drawn. Based on the standard curve, sequence reads of unknown DNA (non-standard DNA) will be converted to the number of DNA copy. The environmental DNA metabarcoding combined with internal standard DNA will enable quantitative monitoring of multispecies environmental DNA.

Identifier
Source https://data.blue-cloud.org/search-details?step=~0124E0093489D51984891BF00936B258C683C36246E
Metadata Access https://data.blue-cloud.org/api/collections/4E0093489D51984891BF00936B258C683C36246E
Provenance
Instrument 532; 308
Publisher Blue-Cloud Data Discovery & Access service; MGnify
Publication Year 2025
OpenAccess true
Contact blue-cloud-support(at)maris.nl
Representation
Discipline Marine Science
Spatial Coverage (135.367W, 35.467S, 135.367E, 35.467N)
Temporal Coverage Begin 2015-04-07T00:00:00Z
Temporal Coverage End 2024-01-18T00:00:00Z